DRSC/TRiP Functional Genomics Resources

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Protein Alignment Recs1 and ybhL

DIOPT Version :10

Sequence 1:NP_650341.1 Gene:Recs1 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_415307.1 Gene:ybhL / 945401 ECOCYCID:G6403 Length:234 Species:Escherichia coli


Alignment Length:221 Identity:50/221 - (22%)
Similarity:97/221 - (43%) Gaps:55/221 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 FIRKVYLI--LLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNEDLRRQ 116
            |..:|:||  ::|||  :||:::|....|   |....:|.:|::...:...:|.::         
E. coli    53 FTNRVFLIGLIIAQL--ALVIVLSAMIQK---LSAGVTTMLFMLYSALTGLTLSSI--------- 103

  Fly   117 TPANFIFLSAFTIAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVS 181
                ||..:|.:||.:|                  ::||.:...::|:...|:.|.:..|.:|..
E. coli   104 ----FIVYTAASIASTF------------------VVTAGMFGAMSLYGYTTKRDLSGFGNMLFM 146

  Fly   182 CLIILLFFGIVTIFVGGHMVTTIYASLSALLFSVYLVYDTQLM--MGGK---------HRYSISP 235
            .||.::...:|..::....:......:..::|.....||||.:  ||.:         .:||   
E. coli   147 ALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYS--- 208

  Fly   236 EEYIFAALNIYMDVMNIFLDILQLIG 261
               |..||.:|:|.:|:||.:|::.|
E. coli   209 ---ILGALTLYLDFINLFLMLLRIFG 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Recs1NP_650341.1 LFG_like 44..261 CDD:198410 49/219 (22%)
ybhLNP_415307.1 BI-1-like_bacterial 16..231 CDD:198414 49/219 (22%)

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