DRSC/TRiP Functional Genomics Resources

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Protein Alignment Recs1 and faim2

DIOPT Version :10

Sequence 1:NP_650341.1 Gene:Recs1 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001072357.1 Gene:faim2 / 779810 XenbaseID:XB-GENE-953203 Length:311 Species:Xenopus tropicalis


Alignment Length:244 Identity:90/244 - (36%)
Similarity:139/244 - (56%) Gaps:22/244 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DDPDKGLGFCSA-------------SIRRGFIRKVYLILLAQLITSLVVIVSLT-ADKRVRLMVA 87
            :.||...|..|.             ::|||||||||.||:.||:.::.|:...| .|.....:.|
 Frog    68 NSPDCSSGIYSGDTEMLTTQSWDNETVRRGFIRKVYAILMIQLLVTVAVVALFTFCDPVKGYIQA 132

  Fly    88 ESTWIFVVAILIVVFS-LVALGCNEDLRRQTPANFIFLSAFTIAESFLLGVAACRYAPMEIFMAV 151
            ...|.:  |...|.|| .:.|.|....||:.|.|.|.|..||::.:::.|:.:..|....:.:.:
 Frog   133 NPGWYW--ASYAVFFSTYLVLACCSGPRRKFPWNLILLCIFTLSMAYITGMLSSFYNTKSVILCL 195

  Fly   152 LITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGI-VTIFVGGHMVT---TIYASLSALL 212
            .|||.||:.:|||:.|::.|||...|:|....::|||.|| :.|.:....:.   .:||.:.|::
 Frog   196 GITALVCMSVTLFSFQSKIDFTSCQGVLFVLSMVLLFSGIFLVILIPFQYIPWLHAVYAVIGAIV 260

  Fly   213 FSVYLVYDTQLMMGGKHRYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
            |:::|.:|||::||.: |||:|||||||.|||||:|::.||..:|||.|
 Frog   261 FTMFLAFDTQMLMGSR-RYSLSPEEYIFGALNIYLDIIYIFSFLLQLFG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Recs1NP_650341.1 LFG_like 44..261 CDD:198410 87/235 (37%)
faim2NP_001072357.1 LFG_like 88..308 CDD:198410 85/222 (38%)

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