DRSC/TRiP Functional Genomics Resources

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Protein Alignment Recs1 and Tmbim1

DIOPT Version :10

Sequence 1:NP_650341.1 Gene:Recs1 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_081430.3 Gene:Tmbim1 / 69660 MGIID:1916910 Length:309 Species:Mus musculus


Alignment Length:268 Identity:91/268 - (33%)
Similarity:147/268 - (54%) Gaps:28/268 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PVH----QYGNRSHQAECIPLGRYTAYGSEI---GQDDPDKGLGFCSASIRRGFIRKVYLILLAQ 65
            |||    .||:..::.|        ..||:.   |:.|..|        :|..||:|||.|:..|
Mouse    59 PVHPMPMNYGHDYNEEE--------RAGSDSFRPGEWDDRK--------VRHSFIQKVYCIISVQ 107

  Fly    66 LITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIFLSAFTIA 130
            |:.::.:|...|..:.|...|..:..::.|:..:.:.:.:.|.|.:..||:.|.|.|.|:.||:|
Mouse   108 LLITVAIIAIFTFVEPVGKYVRNNVAVYYVSYAVFLVTYLTLACCQGPRRRFPWNIILLTIFTLA 172

  Fly   131 ESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVT-- 193
            ..|:.|..:..|....:.:|::|||.|.:.:|:|..||:.|||...||.....|:|:..||||  
Mouse   173 LGFVTGTISSMYETKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLMVTGIVTSI 237

  Fly   194 --IFVGGHMVTTIYASLSALLFSVYLVYDTQLMMGGKHRYSISPEEYIFAALNIYMDVMNIFLDI 256
              ||...:.:..:||:|.|:.|:::|.|||||::|.: :::||||:||..||.||.|::.||..:
Mouse   238 VLIFKYIYWLHMVYAALGAICFTLFLAYDTQLVLGNR-KHTISPEDYITGALQIYTDIVYIFTFV 301

  Fly   257 LQLIGGSD 264
            |||:|..|
Mouse   302 LQLVGSRD 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Recs1NP_650341.1 LFG_like 44..261 CDD:198410 78/220 (35%)
Tmbim1NP_081430.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..84 5/27 (19%)
LFG_like 87..306 CDD:198410 80/227 (35%)
Blue background indicates that the domain is not in the aligned region.

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