DRSC/TRiP Functional Genomics Resources

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Protein Alignment Recs1 and LOC3289993

DIOPT Version :10

Sequence 1:NP_650341.1 Gene:Recs1 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_001688677.1 Gene:LOC3289993 / 3289993 VectorBaseID:AGAMI1_014682 Length:320 Species:Anopheles gambiae


Alignment Length:239 Identity:126/239 - (52%)
Similarity:171/239 - (71%) Gaps:7/239 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 AYGSEIGQDDPD----KGLGFCSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAES 89
            |||:..   ||:    ||..|...|||||||||||.||..||..:|..|......:..:|.|...
Mosquito    83 AYGAAY---DPETGSVKGFEFNDQSIRRGFIRKVYSILTVQLAITLGFITLFLYHRPTKLWVQNH 144

  Fly    90 TWIFVVAILIVVFSLVALGCNEDLRRQTPANFIFLSAFTIAESFLLGVAACRYAPMEIFMAVLIT 154
            ..:|.:|:.::|.:|:::.|..|:||:.|.|||||:.||:|::|||||....::..|:.:||.||
Mosquito   145 PEMFWIALGVMVVTLISMACCGDVRRKAPMNFIFLTLFTLAQAFLLGVTTANFSSQEVMLAVGIT 209

  Fly   155 ASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASLSALLFSVYLVY 219
            |:|||||||||.||::|||||||:|...::||:.||::.||..|..:|.:|||..||:||:||||
Mosquito   210 AAVCLGLTLFAFQTKWDFTVMGGILFVAVLILMLFGLIAIFFPGKTITLVYASAGALIFSIYLVY 274

  Fly   220 DTQLMMGGKHRYSISPEEYIFAALNIYMDVMNIFLDILQLIGGS 263
            |||||:||:|:||||||||||||||:|:|::||||.||.:||.|
Mosquito   275 DTQLMLGGEHKYSISPEEYIFAALNLYLDIVNIFLYILTIIGAS 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Recs1NP_650341.1 LFG_like 44..261 CDD:198410 116/216 (54%)
LOC3289993XP_001688677.1 LFG_like 100..316 CDD:198410 116/215 (54%)

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