DRSC/TRiP Functional Genomics Resources

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Protein Alignment Recs1 and bxi1

DIOPT Version :10

Sequence 1:NP_650341.1 Gene:Recs1 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_588431.1 Gene:bxi1 / 2539556 PomBaseID:SPCC576.04 Length:266 Species:Schizosaccharomyces pombe


Alignment Length:228 Identity:79/228 - (34%)
Similarity:120/228 - (52%) Gaps:31/228 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 CSASIRRGFIRKVYLILLAQL-ITSLVVIVSLTADKRVRLMVAESTWI----------FVVAILI 99
            |:.|||..|:||||.||.||| :|||...:       ..|..|.|.|:          |.:: |:
pombe    50 CAKSIRMAFLRKVYAILTAQLFVTSLFGGI-------FYLHPAFSFWVQMHPWFLILNFFIS-LV 106

  Fly   100 VVFSLVALGCNEDLRRQTPANFIFLSAFTIAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLF 164
            |:|.|:....:      .|.|:|||..||..|...||.|...::...|..||.||..|.:.||.|
pombe   107 VLFGLIMKPYS------YPRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAF 165

  Fly   165 ALQTRYDFTVMGGLLVSCLIILLFFGIVTIFV-GGHMVTTIYASLSALLFSVYLVYDTQLMMGGK 228
            ..|:::||:.:||.|...|..|:...::..|| ....:...:|....|:|..|:::||..::   
pombe   166 TFQSKWDFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFDTYNIL--- 227

  Fly   229 HRYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
            |||  ||||:|.::|.:|:|.:|:|:.|||::|
pombe   228 HRY--SPEEFIMSSLMLYLDFINLFIRILQILG 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Recs1NP_650341.1 LFG_like 44..261 CDD:198410 78/226 (35%)
bxi1NP_588431.1 GAAP_like 29..261 CDD:198411 79/228 (35%)

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