DRSC/TRiP Functional Genomics Resources

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Protein Alignment Recs1 and Faim2

DIOPT Version :10

Sequence 1:NP_650341.1 Gene:Recs1 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_653357.1 Gene:Faim2 / 246274 RGDID:628744 Length:316 Species:Rattus norvegicus


Alignment Length:243 Identity:89/243 - (36%)
Similarity:136/243 - (55%) Gaps:15/243 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PLGRYTAYGSEIGQDDPDKGLGFCSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVA 87
            |.|.:..: |....||         ..:|:.||||||.|||.||:.:|.|:...|....|:..|.
  Rat    81 PAGHHELF-STFSWDD---------QKVRQLFIRKVYTILLVQLLVTLAVVALFTFCDVVKDYVQ 135

  Fly    88 ESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIFLSAFTIAESFLLGVAACRYAPMEIFMAVL 152
            .:...:..:..:...:.:.|.|....||..|.|.|.|:.||::.::|.|:.:..|....:.:.:.
  Rat   136 ANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTIFTLSMAYLTGMLSSYYNTTSVLLCLG 200

  Fly   153 ITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFG-IVTIFVGGHMVT---TIYASLSALLF 213
            |||.|||.:|:|:.||::|||...|:|...|:.|.|.| ::.|.:....|.   .:||.|.|.:|
  Rat   201 ITALVCLSVTIFSFQTKFDFTSCHGVLFVLLMTLFFSGLLLAILLPFQYVPWLHAVYAVLGAGVF 265

  Fly   214 SVYLVYDTQLMMGGKHRYSISPEEYIFAALNIYMDVMNIFLDILQLIG 261
            :::|.:||||:||.: |:|:|||||||.|||||:|::.||...|||.|
  Rat   266 TLFLAFDTQLLMGNR-RHSLSPEEYIFGALNIYLDIIYIFTFFLQLFG 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Recs1NP_650341.1 LFG_like 44..261 CDD:198410 83/220 (38%)
Faim2NP_653357.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
LFG_like 92..312 CDD:198410 85/229 (37%)
Blue background indicates that the domain is not in the aligned region.

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