DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9722 and grina

DIOPT Version :9

Sequence 1:NP_650341.1 Gene:CG9722 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001120085.1 Gene:grina / 100145094 XenbaseID:XB-GENE-5740104 Length:286 Species:Xenopus tropicalis


Alignment Length:271 Identity:112/271 - (41%)
Similarity:161/271 - (59%) Gaps:16/271 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QEPV---HQYGNRSHQAECIPLGRYTAYGSEIGQDDPDKGLG------FCSASIRRGFIRKVYLI 61
            |:|.   .|..|.|.|. .:....|..:.:|.|  .|:...|      |..::|||.|||||||.
 Frog    20 QDPAALNAQINNPSSQI-FLEANSYPEHDAEAG--PPEYTFGVVGSSPFSESAIRRAFIRKVYLT 81

  Fly    62 LLAQLITSLVVIVSLTADKRVRLMVAESTWI-FVVAILIVVFSLVALGCNEDLRRQTPANFIFLS 125
            |..||..::.:|......||::..|.|..:| :.:...|::.:|| |.|.:.:||:.|.|||||.
 Frog    82 LAMQLALTVGLICMFIFWKRLKNWVQEYPYIVYALCPAIIILALV-LACCQQVRRKVPYNFIFLG 145

  Fly   126 AFTIAESFLLGVAACRYAPMEIFMAVLITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFG 190
            .||..|..:||..|..:....:..|...|..|.||||:|||||::|||::.|.|...|::||.||
 Frog   146 LFTAVEGCMLGTIAALFDADAVMWAGGATIVVTLGLTIFALQTKWDFTMLSGGLCVALLVLLCFG 210

  Fly   191 IVTIFVGGHMVTTIYASLSALLFSVYLVYDTQLMMGGKHRYSISPEEYIFAALNIYMDVMNIFLD 255
            |:...:....:..:|||:...:|.:|||.||||::||||||::|||||||||||||:|::|:||.
 Frog   211 ILCGILRSMYLNIVYASIGTFIFGMYLVVDTQLIVGGKHRYAVSPEEYIFAALNIYLDIINLFLM 275

  Fly   256 ILQLIG--GSD 264
            :||:.|  ||:
 Frog   276 LLQIFGICGSN 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9722NP_650341.1 LFG_like 44..261 CDD:198410 99/223 (44%)
grinaNP_001120085.1 DUF4526 <4..>55 CDD:291688 10/37 (27%)
LFG_like 64..281 CDD:198410 98/217 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 221 1.000 Domainoid score I2553
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 1 1.000 - - otm47433
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X332
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

Return to query results.
Submit another query.