Sequence 1: | NP_001287323.1 | Gene: | RpII140 / 41721 | FlyBaseID: | FBgn0262955 | Length: | 1176 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_593101.2 | Gene: | rpb2 / 2541446 | PomBaseID: | SPAC23G3.01 | Length: | 1210 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 1213 | Identity: | 733/1213 - (60%) |
---|---|---|---|
Similarity: | 922/1213 - (76%) | Gaps: | 60/1213 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 YEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVEDSPAIELQAEAQH 74
Fly 75 TSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLTYSAPLYVDITKTKNVEG-- 137
Fly 138 ----------LDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLDPGGYFIINGSE 192
Fly 193 KVLIAQEKMATNTVYVF-SMKDGKYAFKTEIRSCLEHSSRPTSTLWVNMMARGSQNIKKSAIGQR 256
Fly 257 IIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMVKPSLDEAFVVQEQNVALNF 321
Fly 322 IGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLASLGRRELDDR 386
Fly 387 DHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQKFIDRGKDFNLELAIKTNIITDGLRYSLAT 451
Fly 452 GNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETP 516
Fly 517 EGAAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDP 581
Fly 582 EQLMATLRKLRRQMDIIVSEVSMIRDIRDREIRIYTDAGRICRPLLIVEN-------GSLLLKKT 639
Fly 640 HVEMLKERDYNNY--------SWQVLVASGVVEYIDTLEEETVMIAMSP------------YDLK 684
Fly 685 QDKDYA---------YCTTYTHCEIHPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYIT 740
Fly 741 NFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSIVAILCYTGYNQEDSVILNASAVER 805
Fly 806 GFFRSVFYRSYKDSENKRVGDQEENFEKPHRGTCQGMRNAHYDKLDDDGIIAPGIRVSGDDVVIG 870
Fly 871 KTITLPENDDELDSNTKRFSKRDASTFLRNSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGD 935
Fly 936 KFASRHGQKGTCGIQYRQEDMAFTCEGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGD 1000
Fly 1001 ATPFNDAVNVQKISTFLQEYGYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRA 1065
Fly 1066 RGPVQILVRQPMEGRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIA 1130
Fly 1131 NLRNNTFECKGCKNKTQISQVRLPYAAKLLFQELMSMNIAPRL 1173 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpII140 | NP_001287323.1 | PRK08565 | 28..1176 | CDD:236291 | 726/1195 (61%) |
rpb2 | NP_593101.2 | RNA_pol_Rpb2_7 | 18..1204 | CDD:331952 | 724/1193 (61%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 523 | 1.000 | Domainoid score | I46 |
eggNOG | 1 | 0.900 | - | - | E1_COG0085 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H722 | |
Inparanoid | 1 | 1.050 | 1457 | 1.000 | Inparanoid score | I12 |
OMA | 1 | 1.010 | - | - | QHG62192 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000346 | |
OrthoInspector | 1 | 1.000 | - | - | oto100512 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100190 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR20856 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1184 |
SonicParanoid | 1 | 1.000 | - | - | X610 | |
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.860 |