DRSC/TRiP Functional Genomics Resources

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Protein Alignment twf and TWF1

DIOPT Version :9

Sequence 1:NP_650338.1 Gene:twf / 41719 FlyBaseID:FBgn0038206 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_011594.3 Gene:TWF1 / 852971 SGDID:S000003312 Length:332 Species:Saccharomyces cerevisiae


Alignment Length:364 Identity:102/364 - (28%)
Similarity:160/364 - (43%) Gaps:74/364 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHQTGIRANEQLAKVFGKAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDV 65
            ||.|:||.|.:.|.....:..:....||.::    ::|..:|:..:....|.:::|:....::..
Yeast     1 MSTQSGIVAEQALLHSLNENLSADGIVIIIA----KISPDSTSVHQTQVARSFEELVQLASQERE 61

  Fly    66 PCYILYRLDAKIPLGY-SWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEE--LHATTLD 127
            |.||.|:     |.|. .:..:|:.||.:.:|.:|:|||||.||..:.||..::.|  |.....|
Yeast    62 PLYIFYK-----PEGLDKYFFVSFIPDGSPVRSRMLYASTKNTLARQVGSNSLSTEQPLITDAQD 121

  Fly   128 ECTLEGYRRHKQDFAAPA----PLTSREEELKELRKTEVHTEINTNTRHQTLGGINCPL------ 182
            ...|:.:     |.|.||    |||..||...|:.|.:.....||:.:..:....: ||      
Yeast   122 LVDLKNF-----DSARPAGQNKPLTHDEEMQIEINKQQALLRKNTSVKLVSQDSAS-PLSLTFRV 180

  Fly   183 -SEATVAAVQDLVRGKHDYLQFRIDLEEEQIHVSRA----AKVEL-ADLPKQVPEDHARYHLFLF 241
             ||..:..:.| ..|| :.:.|:||...|.|.:.::    :..|| .|||      ...|.:|  
Yeast   181 NSEKPINEILD-SEGK-NLIIFQIDPSNETIQIVQSDTCPSVDELYIDLP------GPSYTIF-- 235

  Fly   242 RHTHEGDYFESYVFVYSMPGYSCSVRERMMYSSCKAPFL-----DELAALGVEVVKKLEIDSGSE 301
               .:||   |..|:||.|..| .|::||:|:|.|..|:     |:..|..    |.:||....|
Yeast   236 ---RQGD---SSFFIYSCPSGS-KVKDRMIYASNKNGFINYLKNDQKIAFS----KVVEIGDFVE 289

  Fly   302 LTEAFL-----QDELH-------PKKILHRPAFAKPKGP 328
            |.::.|     :|.|.       |.|  ....|.|||||
Yeast   290 LDKSLLMATNKEDSLDHGSNPDLPNK--SNLKFNKPKGP 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twfNP_650338.1 ADF_Twf-N_like 4..142 CDD:200441 36/140 (26%)
ADF_Twf-C_like 176..310 CDD:200440 42/155 (27%)
TWF1NP_011594.3 ADF_Twf-N_like 4..124 CDD:200441 34/128 (27%)
ADF_Twf-C_like 175..297 CDD:200440 40/142 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346438
Domainoid 1 1.000 41 1.000 Domainoid score I3236
eggNOG 1 0.900 - - E1_KOG1747
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48140
Inparanoid 1 1.050 66 1.000 Inparanoid score I1730
Isobase 1 0.950 - 0.878984 Normalized mean entropy S2203
OMA 1 1.010 - - QHG54608
OrthoFinder 1 1.000 - - FOG0001842
OrthoInspector 1 1.000 - - oto100361
orthoMCL 1 0.900 - - OOG6_102985
Panther 1 1.100 - - LDO PTHR13759
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1569
SonicParanoid 1 1.000 - - X134
TreeFam 1 0.960 - -
1615.740

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