DRSC/TRiP Functional Genomics Resources

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Protein Alignment twf and Twf2

DIOPT Version :9

Sequence 1:NP_650338.1 Gene:twf / 41719 FlyBaseID:FBgn0038206 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001128710.1 Gene:Twf2 / 684352 RGDID:1591460 Length:349 Species:Rattus norvegicus


Alignment Length:345 Identity:171/345 - (49%)
Similarity:235/345 - (68%) Gaps:2/345 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHQTGIRANEQLAKVFGKAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDV 65
            |:|||||.|.|:|.:.|.||:.|..|:|||.||:|||..||:.|....|::|||:.:.|||:...
  Rat     1 MAHQTGIHATEELKEFFAKARAGSIRLIKVIIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQE 65

  Fly    66 PCYILYRLDAKIPLGYSWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECT 130
            |||:|:|||::...|:.||.::|:||.:.:|.||:||:|:||:|.|||..:|.:||..|..|:.:
  Rat    66 PCYLLFRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLS 130

  Fly   131 LEGYRRHKQDFAAPAPLTSREEELKELRKTEVHTEINTNTRHQTLGGINCPLSEATVAAVQDLVR 195
            |.||::|....||||||||.|.||:::|..||.|||:..::||||.|:..||......|:|.|.:
  Rat   131 LAGYQKHLSSCAAPAPLTSAERELQQIRINEVKTEISVESKHQTLQGLAFPLQPEAQRALQQLKQ 195

  Fly   196 GKHDYLQFRIDLEEEQIHVSRAAKVELADLPKQVPEDHARYHLFLFRHTHEGDYFESYVFVYSMP 260
            ...:|:|.::|||.|.|.:.......:|.||.:||.|.||||.||::||||||..||.||:||||
  Rat   196 KTVNYIQLKLDLERETIELVHTEPTNVAQLPSRVPRDAARYHFFLYKHTHEGDSLESVVFIYSMP 260

  Fly   261 GYSCSVRERMMYSSCKAPFLDELAA-LGVEVVKKLEIDSGSELTEAFLQDELHPKKILHRPAFAK 324
            ||.||::|||:|||||:..||.:.. ..:|:.||:||..|:|||..||.||:|||:...:.||||
  Rat   261 GYKCSIKERMLYSSCKSRLLDSVEQDFQLEIAKKIEIGDGAELTAEFLYDEVHPKQHAFKQAFAK 325

  Fly   325 PKGP-PNRGAKRLTRPTAED 343
            |||| ..||.|||.|...|:
  Rat   326 PKGPGGKRGHKRLIRGPGEN 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twfNP_650338.1 ADF_Twf-N_like 4..142 CDD:200441 64/137 (47%)
ADF_Twf-C_like 176..310 CDD:200440 64/134 (48%)
Twf2NP_001128710.1 ADF_Twf-N_like 4..142 CDD:200441 64/137 (47%)
ADF_Twf-C_like 176..311 CDD:200440 64/134 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353614
Domainoid 1 1.000 144 1.000 Domainoid score I4488
eggNOG 1 0.900 - - E1_KOG1747
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 378 1.000 Inparanoid score I2005
OMA 1 1.010 - - QHG54608
OrthoDB 1 1.010 - - D1578109at2759
OrthoFinder 1 1.000 - - FOG0001842
OrthoInspector 1 1.000 - - otm46417
orthoMCL 1 0.900 - - OOG6_102985
Panther 1 1.100 - - LDO PTHR13759
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X134
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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