DRSC/TRiP Functional Genomics Resources

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Protein Alignment twf and twf2b

DIOPT Version :9

Sequence 1:NP_650338.1 Gene:twf / 41719 FlyBaseID:FBgn0038206 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_009304210.1 Gene:twf2b / 553677 ZFINID:ZDB-GENE-050522-238 Length:369 Species:Danio rerio


Alignment Length:365 Identity:162/365 - (44%)
Similarity:226/365 - (61%) Gaps:22/365 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHQTGIRANEQLAKVFGKAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDV 65
            |||||||.|...|.:...||:.|.||.:|:.|.:|||..||..|..:.|::|||..:.|:|:...
Zfish     1 MSHQTGIHATSDLREFLIKARRGAFRALKIVIRSEQLVLGAYREVSQSWDQDYDACVLPMLDGLE 65

  Fly    66 PCYILYRLDAKIPLGYSWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECT 130
            |||||||||:...|||.||.|||:||.:.:|.|||||:|:||||.|||.::|.:|:..|..::.:
Zfish    66 PCYILYRLDSHNQLGYEWLFISWSPDQSPVRLKMVYAATRATLKKEFGGSHINDEVFGTVQEDIS 130

  Fly   131 LEGYRRHKQDFAAPAPLTSREEELKELRKTE--------------------VHTEINTNTRHQTL 175
            .:||.||....:.|||||:.|::|.:::.||                    ..||||..:::.||
Zfish   131 FQGYLRHLSSSSCPAPLTTAEQQLHQIKITEDKVARDERRIVRPVATVSGQGKTEINVESKNPTL 195

  Fly   176 GGINCPLSEATVAAVQDLVRGKHDYLQFRIDLEEEQIHVSRAAKVELADLPKQVPEDHARYHLFL 240
            .|:..||.|....|:|.....:.:|:|.|:|.|.|.|.:...:..|..:||.::|.|..|||.||
Zfish   196 QGLAFPLQEEAKHALQQFKHKRINYIQLRLDTERETIELVHTSPTETKELPSRIPTDAPRYHFFL 260

  Fly   241 FRHTHEGDYFESYVFVYSMPGYSCSVRERMMYSSCKAPFLDELAA-LGVEVVKKLEIDSGSELTE 304
            ::|.|:|...|:.||:|||||||||::|||:|||||...|||:.. ..:|:.||:||:||..|||
Zfish   261 YKHAHQGQPLEAVVFIYSMPGYSCSIKERMLYSSCKNRLLDEVERDYHIEIAKKMEIESGDGLTE 325

  Fly   305 AFLQDELHPKKILHRPAFAKPKGPP-NRGAKRLTRPTAED 343
            .||.:|::||....|.||:|||||. .||.|||.|...|:
Zfish   326 DFLYEEVYPKHHALRQAFSKPKGPTGKRGNKRLIRGAGEN 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twfNP_650338.1 ADF_Twf-N_like 4..142 CDD:200441 65/137 (47%)
ADF_Twf-C_like 176..310 CDD:200440 61/134 (46%)
twf2bXP_009304210.1 ADF_Twf-N_like 4..142 CDD:200441 65/137 (47%)
ADF_Twf-C_like 196..331 CDD:200440 61/134 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595752
Domainoid 1 1.000 143 1.000 Domainoid score I4589
eggNOG 1 0.900 - - E1_KOG1747
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 362 1.000 Inparanoid score I2151
OMA 1 1.010 - - QHG54608
OrthoDB 1 1.010 - - D1578109at2759
OrthoFinder 1 1.000 - - FOG0001842
OrthoInspector 1 1.000 - - otm26238
orthoMCL 1 0.900 - - OOG6_102985
Panther 1 1.100 - - O PTHR13759
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X134
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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