DRSC/TRiP Functional Genomics Resources

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Protein Alignment twf and twf1b

DIOPT Version :9

Sequence 1:NP_650338.1 Gene:twf / 41719 FlyBaseID:FBgn0038206 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001002304.1 Gene:twf1b / 432375 ZFINID:ZDB-GENE-040711-3 Length:349 Species:Danio rerio


Alignment Length:340 Identity:164/340 - (48%)
Similarity:243/340 - (71%) Gaps:2/340 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHQTGIRANEQLAKVFGKAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDV 65
            |||||||:|..::.::|.||:||::|:|||.||||:|..|.:....|.|::::|..:.||:|.|:
Zfish     1 MSHQTGIQATGEVKEIFAKARNGEYRLIKVVIENEKLVLGGSKRAAKKWDQEWDGCVLPLVEDDM 65

  Fly    66 PCYILYRLDAKIPLGYSWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECT 130
            |.|:|:|||.....||.|:.::|:||.:.:||||:||:|:||||.|||..:|.||:..|..|:.:
Zfish    66 PSYLLFRLDTTNNQGYEWVFLAWSPDHSPVRQKMLYAATRATLKKEFGGGHIKEEIFGTVKDDVS 130

  Fly   131 LEGYRRHKQDFAAPAPLTSREEELKELRKTEVHTEINTNTRHQTLGGINCPLSEATVAAVQDLVR 195
            |.||:::....|||.|||:.||||::::..|:.|:::.:|:.|||.|:..|:....:.|::....
Zfish   131 LNGYKKYLSSQAAPLPLTAAEEELRQIKLNELQTDVHVDTKQQTLQGVAFPMQRDAIQALEQFRD 195

  Fly   196 GKHDYLQFRIDLEEEQIHVSRAAKVELADLPKQVPEDHARYHLFLFRHTHEGDYFESYVFVYSMP 260
            .:.:|:|..||...|.|.:|..|..:|.||||::|:|.||||.||::|:|||||.||.||:||||
Zfish   196 KRINYVQLEIDFPNESIKLSGTAPTDLKDLPKRIPKDAARYHFFLYKHSHEGDYLESTVFIYSMP 260

  Fly   261 GYSCSVRERMMYSSCKAPFLDELAA-LGVEVVKKLEIDSGSELTEAFLQDELHPKKILHRPAFAK 324
            ||.||::|||:|||||.|.:|.:.. ||:|:.||||||:|.|||..|:.:|:|||:..|:.||||
Zfish   261 GYKCSIKERMLYSSCKNPLIDTVERNLGIEIAKKLEIDNGDELTSDFMYEEVHPKQHAHKQAFAK 325

  Fly   325 PKGPP-NRGAKRLTR 338
            ||||. .||.:|:||
Zfish   326 PKGPTGKRGGRRITR 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twfNP_650338.1 ADF_Twf-N_like 4..142 CDD:200441 61/137 (45%)
ADF_Twf-C_like 176..310 CDD:200440 66/134 (49%)
twf1bNP_001002304.1 ADF_Twf-N_like 4..142 CDD:200441 61/137 (45%)
ADF_Twf-C_like 176..311 CDD:200440 66/134 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595754
Domainoid 1 1.000 143 1.000 Domainoid score I4589
eggNOG 1 0.900 - - E1_KOG1747
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48140
Inparanoid 1 1.050 362 1.000 Inparanoid score I2151
OMA 1 1.010 - - QHG54608
OrthoDB 1 1.010 - - D1578109at2759
OrthoFinder 1 1.000 - - FOG0001842
OrthoInspector 1 1.000 - - otm26238
orthoMCL 1 0.900 - - OOG6_102985
Panther 1 1.100 - - O PTHR13759
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1569
SonicParanoid 1 1.000 - - X134
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1615.840

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