DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twf and Twf2

DIOPT Version :9

Sequence 1:NP_650338.1 Gene:twf / 41719 FlyBaseID:FBgn0038206 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_036006.1 Gene:Twf2 / 23999 MGIID:1346078 Length:349 Species:Mus musculus


Alignment Length:345 Identity:170/345 - (49%)
Similarity:235/345 - (68%) Gaps:2/345 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHQTGIRANEQLAKVFGKAKNGKFRVIKVSIENEQLSCGATAETKKDWERDYDKLIGPLLEKDV 65
            |:|||||.|.|:|.:.|.||:.|..|:|||.||:|||..||:.|....|::|||:.:.|||:...
Mouse     1 MAHQTGIHATEELKEFFAKARAGSIRLIKVIIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQE 65

  Fly    66 PCYILYRLDAKIPLGYSWLLISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECT 130
            |||:|:|||::...|:.||.::|:||.:.:|.||:||:|:||:|.|||..:|.:||..|..|:.:
Mouse    66 PCYLLFRLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGTVKDDLS 130

  Fly   131 LEGYRRHKQDFAAPAPLTSREEELKELRKTEVHTEINTNTRHQTLGGINCPLSEATVAAVQDLVR 195
            |.||::|....||||||||.|.||:::|..||.|||:..::||||.|:..||......|:|.|.:
Mouse   131 LAGYQKHLSSCAAPAPLTSAERELQQIRINEVKTEISVESKHQTLQGLAFPLQPEAQRALQQLKQ 195

  Fly   196 GKHDYLQFRIDLEEEQIHVSRAAKVELADLPKQVPEDHARYHLFLFRHTHEGDYFESYVFVYSMP 260
            ...:|:|.::|||.|.|.:.......:|.||.::|.|.||||.||::||||||..||.||:||||
Mouse   196 KTVNYIQLKLDLERETIELVHTEPTNVAQLPSRIPRDAARYHFFLYKHTHEGDALESVVFIYSMP 260

  Fly   261 GYSCSVRERMMYSSCKAPFLDELAA-LGVEVVKKLEIDSGSELTEAFLQDELHPKKILHRPAFAK 324
            ||.||::|||:|||||:..||.:.. ..:|:.||:||..|:|||..||.||:|||:...:.||||
Mouse   261 GYKCSIKERMLYSSCKSRLLDSVEQDFQLEIAKKIEIGDGAELTAEFLYDEVHPKQHAFKQAFAK 325

  Fly   325 PKGP-PNRGAKRLTRPTAED 343
            |||| ..||.|||.|...|:
Mouse   326 PKGPGGKRGHKRLIRGPGEN 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twfNP_650338.1 ADF_Twf-N_like 4..142 CDD:200441 64/137 (47%)
ADF_Twf-C_like 176..310 CDD:200440 63/134 (47%)
Twf2NP_036006.1 ADF_Twf-N_like 4..142 CDD:200441 64/137 (47%)
ADF_Twf-C_like 176..311 CDD:200440 63/134 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..349 15/24 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849933
Domainoid 1 1.000 143 1.000 Domainoid score I4627
eggNOG 1 0.900 - - E1_KOG1747
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 375 1.000 Inparanoid score I2063
Isobase 1 0.950 - 0.878984 Normalized mean entropy S2203
OMA 1 1.010 - - QHG54608
OrthoDB 1 1.010 - - D339757at33208
OrthoFinder 1 1.000 - - FOG0001842
OrthoInspector 1 1.000 - - otm44318
orthoMCL 1 0.900 - - OOG6_102985
Panther 1 1.100 - - LDO PTHR13759
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1569
SonicParanoid 1 1.000 - - X134
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

Return to query results.
Submit another query.