DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Abi and ABIL3

DIOPT Version :9

Sequence 1:	NP_001247091.1	Gene:	Abi / 41718	FlyBaseID:	FBgn0020510	Length:	477	Species:	Drosophila melanogaster
Sequence 2:	NP_197819.2	Gene:	ABIL3 / 832498	AraportID:	AT5G24310	Length:	321	Species:	Arabidopsis thaliana

Alignment Length:	329	Identity:	66/329 - (20%)
Similarity:	128/329 - (38%)	Gaps:	37/329 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 PMASE-NIMDELASLIRTEIPDGRQSLRDSYTNLERVADYCEDTYYRADNKKAALEATKNYTTQS 69
            ||..| :..||::........|..:.|::..|.|...|:|.|.:|...:.|:..:|..|:|..::
plant     8 PMPREASNYDEISMQQSMLFSDSLKDLKNLRTQLYSAAEYFELSYTNDEQKQIVVETLKDYAIKA 72

  Fly    70 LASVAYQINTLAYSYMQLLELQAQQLGEMESQMNHIAQTVHIHKEKVARREIGVLTANKVSSRQF 134
            |.:....:.::.|.....::.:..::...|.:::.|.|.:.:.:|.:         .::..|:|.
plant    73 LVNTVDHLGSVTYKVNDFVDEKVDEVAGTELRVSCIEQRLRMCQEYM---------DHEGRSQQS 128

  Fly   135 KIVAPINPEKPIKYVRKPIDYSMLDEIGHGINSAQHSQVRQKHRGSS-----HGSVQSLLPPSVG 194
            .::.  .|:...:|      :....||..|.|.|:...|.....|..     ..:|::.: ....
plant   129 LVID--TPKFHKRY------FLPSGEIKRGGNLAKLKNVEGSFDGEDDWNQFRNAVRATI-RETP 184

  Fly   195 PPPTTKP-PTPPQMSRAGNTGTLGKSVSNTGTLGKSSREYRTPPVVNPPQVPSHYAPNYPIGHPK 258
            |||..|| ...|...:...:.|.  |.|:..|..|..::.|   .|:|.:.|...:.:..| .|.
plant   185 PPPVRKPILQSPSQRKPQRSATF--SFSSIATAPKKEQDKR---AVSPHRFPLLRSGSVAI-RPS 243

  Fly   259 RMS----TASSTMTTTTTGGGAAGNERAAGYSALPMPPSQQIATHVNLPSAG--MMQSLPPPPPT 317
            .:|    .:.|...|.|.....:...|:|.........:|:...|...||..  ::::|.....|
plant   244 SISRPTTPSKSRAVTPTPKRYPSEPRRSASVRVAFEKEAQKEPEHQQQPSKSKRLLKALLSRRKT 308

  Fly   318 TYDD 321
            ..||
plant   309 KKDD 312

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Abi	NP_001247091.1	Abi_HHR	105..168	CDD:400255	11/62 (18%)
Abi	NP_001247091.1	SH3_Abi	423..474	CDD:212760
ABIL3	NP_197819.2	PHA03247	<173..274	CDD:223021	24/107 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10460
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100