DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abi and abi3a

DIOPT Version :9

Sequence 1:NP_001247091.1 Gene:Abi / 41718 FlyBaseID:FBgn0020510 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_005164105.1 Gene:abi3a / 767807 ZFINID:ZDB-GENE-060929-958 Length:530 Species:Danio rerio


Alignment Length:559 Identity:179/559 - (32%)
Similarity:258/559 - (46%) Gaps:123/559 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MASENIMDELASLIRTEIPDGRQSLRDSYTNLERVADYCEDTYYRADN-KKAALEATKNYTTQSL 70
            |..:|..||:..::. |.|..|::|.|:|.||.:||:|||:.|.::.| ...|||.||.:|||||
Zfish     1 MKDQNYSDEITKILE-EAPTARKALLDNYDNLHKVAEYCENNYLKSGNDSNKALEETKAFTTQSL 64

  Fly    71 ASVAYQINTLAYSYMQLLELQAQQLGEMESQMNHIAQTVHIHKEKVARREIGVLTANKVSSRQFK 135
            |||||||::||.:.::||:.|..||.::||.:|.|.|||.:|:|||||||||..|..|...|..|
Zfish    65 ASVAYQISSLATNVLKLLDAQTLQLRKIESSVNQIGQTVDMHREKVARREIGAFTVGKRVPRNHK 129

  Fly   136 IVAPI-NPEKPIKYVRKPIDYSMLDEIGHGINSAQHSQVRQKHRGSSHGSVQSLLPPSVGPPPTT 199
            :|.|. |.|..:||.|.||.:|.||.:|||:..:...|::......|    .|:|.....||...
Zfish   130 VVPPAKNKEAKLKYTRTPISFSSLDSVGHGVKDSGQPQLKTATMSRS----GSILSRGGRPPEPV 190

  Fly   200 KPPTPPQMSRAGNTGTLG-KSVSNT----------------------GTLGKSSREYRTPPVVNP 241
            :.|..|.:|...:..:|. ||::::                      |||.:..||...||  .|
Zfish   191 QCPVAPSLSHGASLTSLNDKSITSSFGIAVPPPVVPSWPTSPDSDIIGTLSEEVREEGPPP--PP 253

  Fly   242 PQVPSHYAPNY---------PIGHPKRMSTASSTMTTTTTGGGAAGNERAAGYSALPMPPSQQIA 297
            |.:.:....|:         |...|..|...:|                      :|.||...|:
Zfish   254 PMMEAEGEVNHAQEAAPPAPPPPPPPPMDCPNS----------------------IPPPPPMPIS 296

  Fly   298 THVNLPSAGMMQSLPPPPP-----TTYDD--------RSSMPPAP-------PSPLTVSQHEMTE 342
               :.|....|.::|||||     |..::        ...|||.|       |||..:...|..|
Zfish   297 ---STPEPSSMMAIPPPPPAPPLETVAEEIGFPPPEALGDMPPPPAPDGIDLPSPPPLPGEENIE 358

  Fly   343 -----QSHIGMH-----TLGRNINRNPN-RNHFSLNFARPGSQS---PPLPPPPPP--------- 384
                 :|.:..|     :|...:...|: |:.::.:...|.:||   ||.||.|||         
Zfish   359 ALRSRRSRVRRHPPSTRSLSLRVRMGPSARSLYTRSLFLPAAQSLMIPPPPPYPPPLAPPASLSP 423

  Fly   385 ------EDEHQDFGRPRTSTGPQL--------APIVPEDQNLPGWVPKNFIEKVVAIYDYYADKD 435
                  ..:|.|...|.....|.|        .|.:|...:.....|.:::|||||:|.|...|.
Zfish   424 LCRIPARLQHLDLEIPAPPPSPPLDDFDSYEEMPPLPPPIDYDMSAPVDYLEKVVALYTYDTGKP 488

  Fly   436 DELSFQESSVLYVLKKNDDGWWEGVMDGVTGLFPGNYVE 474
            .:|.|||..::|:..:|:|||.|||::||.|.|||||||
Zfish   489 GDLVFQEGDIIYLTSRNEDGWCEGVLNGVKGYFPGNYVE 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AbiNP_001247091.1 Abi_HHR 105..168 CDD:400255 33/63 (52%)
SH3_Abi 423..474 CDD:212760 27/50 (54%)
abi3aXP_005164105.1 Abi_HHR 99..177 CDD:285106 35/81 (43%)
SH3_Abi 476..527 CDD:212760 27/50 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2546
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1478981at2759
OrthoFinder 1 1.000 - - FOG0001315
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10460
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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