Protein Alignment Abi and CAP

DIOPT Version :10

• Sequence 1: NP_001247091.1
• Gene: Abi / 41718
• FlyBaseID: FBgn0020510
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001369075.1
• Gene: CAP / 36084
• FlyBaseID: FBgn0033504
• Length: 2568
• Species: Drosophila melanogaster
• Alignment Length: 676
• Identity: 119/676 - (17%)
• Similarity: 192/676 - (28%)
• Gaps: 306/676 - (45%)

  Fly    23 EIPDGRQSLRDSYTNLERVADYCEDTYYRADNKKAALEATKNYTTQSLASVAYQINTLAYSYMQL 87
            ::|||.|..|  :...|| .:...|..:.:..||.::..|            |:::.|..|..
  Fly  1773 QLPDGAQMER--HEEQER-REEATDNAHSSATKKTSIVKT------------YKVSRLPPSVQ-- 1820

  Fly    88 LELQAQQLGEMESQMN---------HIAQTVHIHKEKVARREIGVLTANKVSSRQFKIVAPINPE 143
                    ||...|.:         ..:||..:....:...    ||:|..||..    :..||
  Fly  1821 --------GEFPGQFSGGNRGRLYRERSQTARLVSHNIPLE----LTSNHSSSPD----SDFNP- 1868

  Fly   144 KPIKYVRKPIDYSMLDEIGHGINSAQHSQVRQKHRGSSHGSVQSLL-PPSVGPPPTTKPPTPPQM 207
                              |.|.:.|..|        |:..|:.||: .|:..|||..:|..|...
  Fly  1869 ------------------GCGSSPAPGS--------STQSSIPSLVQSPTPAPPPPIEPLNPSSS 1907

  Fly   208 SRAGNTGT---LGKSV------------------SNTGT--------LGKSSREY-RTPPVVN-- 240
            :..|..||   ||.|:                  ..||:        ||:  |:| ...||.|
  Fly  1908 TAGGILGTALLLGLSLLTAWNKFIYKVKHEYMSEPETGSDRPRKMAQLGR--RQYDGIGPVTNDG 1970

  Fly   241 ----------------------------------------PPQVPSHYA--------PNYPIGH- 256
                                                    |...||:.:        |||...:
  Fly  1971 MPIILRSEVKEPHQHEWYKRLYQTIHKQKNGDDFVIRYKCPRARPSYKSNGYVSEPEPNYDSDYS 2035

  Fly   257 --------PKRMSTASSTMTTT---------------------------------TTGGGAA--- 277
                    |.|:.:.||.:...                                 |||..:.
  Fly  2036 TVRYRTQNPHRVQSVSSAVNVRNLNQDEKLYGTMPNPIKSAQNSYKNQPGRIENYTTGHSSVSEK 2100

  Fly   278 ----------------------------GN-----ERAAGYS--------------ALPMPPSQQ 295
                                        ||     .:.:||:              :.|:.|.:|
  Fly  2101 EKKEWWDEVMDIFNGNLEQSKLSPLYTEGNLSRALAKESGYTSDSNLVFRKKEVPVSSPLSPVEQ 2165

  Fly   296 IATHVNLPSAG---MMQSLPPPPPTTYDDRSSMPPAPPSPLT--VSQHEM------TEQSHIGMH 349
            ...:.:|.:.|   ::....|.|....|...:.||.||.|..  :|.::.      .:.|.:.:|
  Fly  2166 KQAYKSLQAGGEPPLLGFRKPAPEKPRDLDPNAPPIPPQPPVKGLSSYDFPYSTDTVDGSDVNIH 2230

  Fly   350 TLGRNINRNPNRNHFS------------------------------LNFARPGSQSPPLPPPPPP 384
            .  :...|:..|.:.|                              :|..|......|....|..
  Fly  2231 F--KTPIRHEQRQNLSEEELAIRQAEHMQKLYHEERRRKYLQELQDMNSRRHTDNFTPSQKSPIA 2293

  Fly   385 EDEHQDFGRPRTSTGPQLAPIVPEDQNLPGWV-PKNFIEKVVAIYDYYADKDDELSFQESSVLYV 448
            .:.:.||               |.|..|...| ||....   |::::......||||::...:|:
  Fly  2294 LNRYDDF---------------PTDVTLKSLVGPKTVAR---ALFNFQGQTSKELSFRKGDTIYI 2340

  Fly   449 LKKNDDGWWEGVMDGVTGLFPGNYVE 474
            .::.|..|:||..:.:.||.|.:|||
  Fly  2341 RRQIDANWYEGEHNAMIGLLPASYVE 2366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abi	NP_001247091.1	Abi_HHR	105..168	CDD:462279	11/62 (18%)
		SH3_Abi	423..474	CDD:212760	14/50 (28%)
CAP	NP_001369075.1	Sorb	1959..2003	CDD:470634	4/43 (9%)
		SH3_Sorbs_1	2315..2367	CDD:212715	16/55 (29%)
		SH3_Sorbs_2	2384..2436	CDD:212716
		SH3_Sorbs_3	2514..2567	CDD:212714