DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abi and Abi3

DIOPT Version :10

Sequence 1:NP_001247091.1 Gene:Abi / 41718 FlyBaseID:FBgn0020510 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001013136.1 Gene:Abi3 / 303476 RGDID:1311794 Length:367 Species:Rattus norvegicus


Alignment Length:478 Identity:160/478 - (33%)
Similarity:224/478 - (46%) Gaps:131/478 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MDELASLIRTEIPDGRQSLRDSYTNLERVADYCEDTYYRADNKKAALEATKNYTTQSLASVAYQI 77
            :.:|..|...:||.||::||.:::.|.|||:||||.|.:|.:|:.|||.|..:|||:|||||||:
  Rat     4 LQQLQQLQEFDIPTGREALRGNHSALLRVANYCEDNYLQATDKRKALEETMAFTTQALASVAYQV 68

  Fly    78 NTLAYSYMQLLELQAQQLGEMESQMNHIAQTVHIHKEKVARREIGVL-TANKVSSRQFKIVAP-- 139
            ..||...:::|:||...|.::|::|:.:.|.|::|.|||||||||.| |..::...| |::.|  
  Rat    69 GNLAGHTLRMLDLQGAALRQVEAKMSTLGQMVNMHLEKVARREIGTLATVVRLPPSQ-KVIPPES 132

  Fly   140 INPEKPIKYVRKPIDYSMLDEIGHGINSAQHSQVRQKHRGSSHGSVQSLLPPSVGPPPTTKPPTP 204
            :.|..|  |.|||::::.||::|||:....                                   
  Rat   133 LPPLTP--YCRKPLNFACLDDVGHGVKDLS----------------------------------- 160

  Fly   205 PQMSRAGNTGTLG-KSVS-----NTGTLGKSSREYRTPPVVNPPQVPSHYAPNYPIGHPKRMSTA 263
            .|:||   ||||. ||:.     .:.|||      |.|.:..|.|:|:     .|.|   ::|.|
  Rat   161 TQLSR---TGTLSRKSIKAPATPASATLG------RPPRIPEPVQLPA-----VPDG---KLSAA 208

  Fly   264 SSTMTTTTTGGGAAGNERAAGYSALPMPPSQQIATHVNLPSAGMMQSLPPPPPTTYDDRSSMPPA 328
            ||..:..:.|.       |.|.|.:|....|            :..:.|||||..    ...||.
  Rat   209 SSVSSLASAGS-------AEGASGIPQSKGQ------------VAPATPPPPPIA----PVTPPP 250

  Fly   329 PPSPLTVSQHEMTEQSHIGMHTLGRNINRNPNRNHFSLNFARPGSQSPP---LPPPPPPEDEHQD 390
            ||.|..:                            |.|......||.||   ||.||||..:..:
  Rat   251 PPLPAEI----------------------------FLLPPPMEESQPPPETELPLPPPPALQGDE 287

  Fly   391 FG---RPRTSTGPQLAPIVPEDQNLPGWVPKNFIEKVVAIYDYYADKDDELSFQESSVLYVLKKN 452
            .|   .|....||        |:  |.|||..::||||.:|.|...||:||||.|.:|:.|.::.
  Rat   288 LGLLPPPPPGFGP--------DE--PSWVPAAYLEKVVTLYPYTRQKDNELSFSEGTVICVTRRY 342

  Fly   453 DDGWWEGVMDGVTGLFPGNYVEP 475
            .|||.|||....||.||||||||
  Rat   343 SDGWCEGVSSEGTGFFPGNYVEP 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AbiNP_001247091.1 Abi_HHR 105..168 CDD:462279 28/65 (43%)
SH3_Abi 423..474 CDD:212760 27/50 (54%)
Abi3NP_001013136.1 Abi_HHR 96..159 CDD:462279 28/65 (43%)
SH3_Abi 313..364 CDD:212760 27/50 (54%)

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