DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kif19A and AT5G60930

DIOPT Version :10

Sequence 1:NP_996208.1 Gene:Kif19A / 41717 FlyBaseID:FBgn0038205 Length:750 Species:Drosophila melanogaster
Sequence 2:NP_001332385.1 Gene:AT5G60930 / 836214 AraportID:AT5G60930 Length:1335 Species:Arabidopsis thaliana


Alignment Length:738 Identity:215/738 - (29%)
Similarity:316/738 - (42%) Gaps:205/738 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VAVRVRP--SMEATERCIEVISGGSLLYDDGGKSRPRQ---------YSYDHVFRENDSQ-EQVY 90
            |||.:||  :.|....|.:.|:           ..|::         ::||.|:...... .::|
plant     9 VAVNIRPLITPELLNGCTDCIT-----------VAPKEPQVHIGSHTFTYDFVYGNGGYPCSEIY 62

  Fly    91 KTTTAPLVRDVLNGLNAAVFAYGATGSGKTHTMLGPVPRKKPQTSDRAPPTASCDSTDVSSQ--D 153
            ....||||..:..|.||.|.|||.||||||:||                      .|:.|..  :
plant    63 NHCVAPLVDALFKGYNATVLAYGQTGSGKTYTM----------------------GTNYSGDCTN 105

  Fly   154 IGLMVRAIEDIFSHIESA-EAYSCRVSISYLEIYNELIRDLL---------NPGG---------- 198
            .|::...:||||..:|:. ::....:.:|::||:.|.:.|||         |..|          
plant   106 GGVIPNVMEDIFRRVETTKDSSELLIRVSFIEIFKEEVFDLLDSNSSALLKNDSGVQAKHTALSR 170

  Fly   199 -PLELREDHRGQRITVAGLSEITTSSRKEVVSLLLKGNKARTMEPTAANQTSSRSHALLSIMVQA 262
             |:::||...| .||:||::|....:::|:.|.|.:|:.:|....|..|..||||||:.:|.::.
plant   171 APIQIRETASG-GITLAGVTEAEVKTKEEMGSFLARGSLSRATGSTNMNSQSSRSHAIFTITLEQ 234

  Fly   263 RTPLG-----TKQG-------RLFLTDLAGSERAKKTKNRGKRLQEGAHINRSLLALGNVINGL- 314
            :...|     |:.|       :|.|.|||||||||:|...|.||:||.|||:.||||||||:.| 
plant   235 KKIAGGSCTTTEDGGEDILCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLALGNVISALG 299

  Fly   315 ------SGGARYVNYRDSKLTRLLKEALSGRCKTVMIAHVAPESKHRDETKNTLVYADRANSITT 373
                  .||  :|.||||||||||:::|.|..||||||.|:|...:.:||.|||.||:||.:|  
plant   300 DEKKRKEGG--HVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNI-- 360

  Fly   374 KLQNSVYIDEFKDFPTKHYQSLVSELRDEVSRLRTKMLTERPRSGAAAAAAAAAASGSAGTAGSG 438
              ||...|:  :|..|...|    .:|.::.:|:|::|..|..|||.                  
plant   361 --QNKAVIN--RDPATAQMQ----RMRSQIEQLQTELLFYRGDSGAF------------------ 399

  Fly   439 AGSEAVQEQDEQRKTELRYLREQIVLTFKQQMKLRRKLLE---AESHLLGLELDA--ERQHMIIS 498
                          .||:.|:.:|.|......:|..:|.|   |..|......||  |:..:|:.
plant   400 --------------DELQILKHKISLLEASNRELHNELQERRVASEHFSKRAYDAQVEKDKLIMI 450

  Fly   499 HWQGRIGKLYDAMGDDDIES--EGSVALKNAW-GELAAIEKETRRYKEIRERTEH---------- 550
            ....|.||..     |:|||  ...|.|.|.: .::..:|.|....|.:::.:.|          
plant   451 IESVRNGKSL-----DEIESCQNEDVGLVNKYVSKIQELEGELLHIKNLKKTSNHQYSDDSYDVG 510

  Fly   551 ------------ELEQCRQKGVKLEDELPERISSDEERELLALLCRVHELEADKVSLQAERLARQ 603
                        |...|..|.:.:.|||                 ...|.|.:..||| |:|  .
plant   511 PRSNNVLFPSSNESSDCEDKVMDVTDEL-----------------EFQEKEIEHCSLQ-EKL--D 555

  Fly   604 AELRRRDLQLLRAERQ-RRLCEDIISSQRRLIEEGNVDLPDELRELYGLYQQEI----HAGVVTP 663
            .||:..|.:|...|.: :|......|..::..|:...||..|.|.|    |:||    |.....|
plant   556 MELKELDKRLEEKEAEMKRFSSGGTSVLKQHYEKKVYDLEQEKRAL----QREIEGLRHNLASIP 616

  Fly   664 S---------TSNYERKLPPIYT 677
            |         ...|.:||..:.|
plant   617 SGPGDGAQKLKEEYVQKLNTLET 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif19ANP_996208.1 Motor_domain 35..371 CDD:473979 136/386 (35%)
SMC_prok_B <393..672 CDD:274008 70/322 (22%)
AT5G60930NP_001332385.1 KISc_KIF4 6..361 CDD:276823 137/391 (35%)
SMC_prok_B 529..>845 CDD:274008 34/135 (25%)

Return to query results.
Submit another query.