DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kif19A and kif18a

DIOPT Version :9

Sequence 1:NP_996208.1 Gene:Kif19A / 41717 FlyBaseID:FBgn0038205 Length:750 Species:Drosophila melanogaster
Sequence 2:NP_001016245.2 Gene:kif18a / 548999 XenbaseID:XB-GENE-990470 Length:947 Species:Xenopus tropicalis


Alignment Length:670 Identity:204/670 - (30%)
Similarity:319/670 - (47%) Gaps:123/670 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VAVRVRPSMEATE-----RCIEVISGGSLLYD----DGG---------------KSRPRQYSYDH 78
            |.|||||..|..:     |.::|:....|::|    :.|               |::..::.:|.
 Frog    14 VVVRVRPENEKEKQGNFSRVVQVVDNHILVFDPKVEEVGFFHGRSAANRDITKRKNKDLKFVFDC 78

  Fly    79 VFRENDSQEQVYKTTTAPLVRDVLNGLNAAVFAYGATGSGKTHTMLGPVPRKKPQTSDRAPPTAS 143
            ||.::.:|.:|::.||..::..||||.|..|.||||||:||||||||                  
 Frog    79 VFDDSSTQLEVFEQTTKIVLEGVLNGYNCTVLAYGATGAGKTHTMLG------------------ 125

  Fly   144 CDSTDVSSQDIGLMVRAIEDIFSHIESA-EAYSCRVSISYLEIYNELIRDLLNPGGPLELREDHR 207
                  |..:.|:|...:.::::.|||. :...|.|:|||||:|.|.|||||:..|.|.:|||.:
 Frog   126 ------SPGEPGVMYLTMMELYNRIESVKDEKVCNVAISYLEVYIEQIRDLLSNSGALAVREDAQ 184

  Fly   208 GQRITVAGLSEITTSSRKEVVSLLLKGNKARTMEPTAANQTSSRSHALLSIMVQ-----ARTPLG 267
             :.:.|.||:.....|.:|::.:|..|||.||..||..|.:||||||:..|.::     |.....
 Frog   185 -KGVVVQGLTLHQPKSAEEILQMLDYGNKNRTQHPTDMNASSSRSHAVFQIYLRQQDKTASINQN 248

  Fly   268 TKQGRLFLTDLAGSERAKKTKNRGKRLQEGAHINRSLLALGNVINGLS---GGARYVNYRDSKLT 329
            .:..::.|.||||||||..|..:|:||:||.:|||||||||||||.|:   ...:::.||:||||
 Frog   249 VRIAKMCLIDLAGSERASATNAKGERLREGTNINRSLLALGNVINALADPKSKKQHIPYRNSKLT 313

  Fly   330 RLLKEALSGRCKTVMIAHVAPESKHRDETKNTLVYADRANSITTKLQNSVYIDEFKDFPTKHYQS 394
            ||||::|.|.|:|:|||.|:|.|...|:|.|||.||:||..|.:.::::|.   ..|.....|..
 Frog   314 RLLKDSLGGNCRTIMIAAVSPSSLSYDDTYNTLKYANRAKDIKSAVKSNVV---SLDSHISQYVK 375

  Fly   395 LVSELRDEVSRLRTKMLTERPRSGAAAAAAAAAASGSAGTAGSGAGSEAVQEQDEQRKTELRYLR 459
            :..:.:.|::.|:.|:.....:...|                .|...:.|.....|.:.|::..:
 Frog   376 ICEQQKKEIAALKEKLKAYEDQKAIA----------------PGKPKQNVLLPPCQNQAEIKRFQ 424

  Fly   460 EQIVLTFKQQMKLRRKLLEAESHLLGLELDA-------ERQHMIISHWQGRIGKLYDAMGDDDIE 517
            |.:...|..:.::|.:.|..|......||..       |:..|:.|  |.:..|. ....|..:|
 Frog   425 EILRCLFTNREEIRAEYLNLEMRFKENELKTYYQKQCFEQIQMLCS--QEKAVKA-SCKRDHRVE 486

  Fly   518 SEGSVALKNAWGELAAIEKETRRYKEIRERTE--HELEQCRQKGVKLEDELPERISSDEERELLA 580
                 .|||.  .:...:|:....|.:.|.|.  |.||. ..|.:..:.::||.:..|       
 Frog   487 -----VLKNQ--NVLLQKKKEDELKRLEENTTWLHRLES-EMKLLNNDGKMPEELGKD------- 536

  Fly   581 LLCRVHELEADKVSLQAERLARQAELRRRDLQLLRAERQRRLCEDII-----SSQRRLIEEGNVD 640
            |.|....||...:..|.:.:.|...|:         ||:.|..|.::     |.:|:.:....|.
 Frog   537 LQCHHLTLEVTDLKTQIKHMTRLVALQ---------ERENRYNEKLVNALLPSLRRQYLLLSQVG 592

  Fly   641 LPD-----ELRELYGLYQQE 655
            |.|     :.:::..|.|:|
 Frog   593 LADTCVEADFKKIEQLVQRE 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif19ANP_996208.1 Motor_domain 35..371 CDD:277568 145/365 (40%)
Kinesin 41..371 CDD:278646 143/362 (40%)
kif18aNP_001016245.2 Kinesin 20..355 CDD:278646 140/359 (39%)
KISc_KIP3_like 20..355 CDD:276821 140/359 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000448
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R640
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.