DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif19A and Cenpe

DIOPT Version :9

Sequence 1:NP_996208.1 Gene:Kif19A / 41717 FlyBaseID:FBgn0038205 Length:750 Species:Drosophila melanogaster
Sequence 2:XP_038959788.1 Gene:Cenpe / 362044 RGDID:1307115 Length:2456 Species:Rattus norvegicus


Alignment Length:736 Identity:204/736 - (27%)
Similarity:307/736 - (41%) Gaps:164/736 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AQEERLVVAVRVRPSMEATERCIEV------ISGGSLLYDDGGKSRPRQYSYDHVFRENDSQEQV 89
            |:|..:.|.|||||.....|...|.      ....::...|||||    :.:|.||..|::.:.|
  Rat     2 AEEAAVAVCVRVRPLNSREEELGEASHIYWKTDKNAIYQSDGGKS----FQFDRVFHSNETTKNV 62

  Fly    90 YKTTTAPLVRDVLNGLNAAVFAYGATGSGKTHTMLGPVPRKKPQTSDRAPPTASCDSTDVSSQD- 153
            |:....|::...:.|.|..:||||.|.|||||||:|                         |:| 
  Rat    63 YEEIAVPIISSAIQGYNGTIFAYGQTASGKTHTMMG-------------------------SEDC 102

  Fly   154 IGLMVRAIEDIFSHIESAEAYSCRVSISYLEIYNELIRDLL---NPGGPLELREDHRGQRITVAG 215
            :|::.|||.|||..|:........:.:||:|||||.|.|||   ....||.:||| ..:.:.||.
  Rat   103 LGVIPRAIHDIFQRIKKFPEREFLLRVSYMEIYNETITDLLCNTQKVKPLIIRED-INRNVYVAD 166

  Fly   216 LSEITTSSRKEVVSLLLKGNKARTMEPTAANQTSSRSHALLSIMVQARTPL-------GTKQGRL 273
            |:|....:.:..:..|..|.|.|....|..||.|||||.:..:::::|...       ..|...|
  Rat   167 LTEEVVYTAEMALKWLATGEKNRHYGITKMNQRSSRSHTIFRMILESREKAESSNCDGSIKVSHL 231

  Fly   274 FLTDLAGSERAKKTKNRGKRLQEGAHINRSLLALGNVINGLSGG--ARYVNYRDSKLTRLLKEAL 336
            .|.||||||||.:|...|.||:||.:|||:||.||.||..||.|  ..::|||||||||:|:.:|
  Rat   232 NLVDLAGSERAAQTGAEGMRLKEGCYINRNLLILGQVIKKLSDGQVGGFINYRDSKLTRILQNSL 296

  Fly   337 SGRCKTVMIAHVAPESKHRDETKNTLVYADRANSITTKLQNSVYIDEFKDFPT--KHYQSLVSEL 399
            .|..||.:|..:.|.|  .|||..||.:|..|.    .::|:.|::|..:...  |.|:..:.:|
  Rat   297 GGNAKTRIICTITPAS--LDETLTTLQFASTAK----YMKNTPYVNEVSNDEALLKRYRREIVDL 355

  Fly   400 RDEVSRLRTKMLTERPRSGAAA-------------------AAAAAAASGSAGTA---------- 435
            :.::..:.||...:.......|                   .......|.|....          
  Rat   356 KKQLEEVNTKTRAQEIEKDQLAQLLDEKDLLQKVQDEKIQNLKRMLVTSSSIALQQELEIKKKRR 420

  Fly   436 -----GSGAGSEAVQE-------QDEQRKTELRYLREQIVLTFKQQMKLRRKLLEAESHLLGLEL 488
                 |....|..|:|       ....|||.:..|||..:      |||....|..||.:    .
  Rat   421 VTWCFGKMKDSNYVKEFKIPTNITTRTRKTSVTPLRENSL------MKLGESALSWESEV----F 475

  Fly   489 DAERQHMIISHWQGRIGKLYDAMGDDDIESEGSVALKNAWGELAAIEKETRRYKE-----IRERT 548
            |...:.:..:.|......|    .::::||| ..:|...:..|....::.||..|     ::|:.
  Rat   476 DNTLEPLAEAEWSSATALL----SEENLESE-LTSLNTQYNNLVLDYEQLRRENEDLKLKLKEKN 535

  Fly   549 EHE----LEQCRQKGVKLE--DEL---------PERISSDEERELLALLCRVHELEADKVSLQAE 598
            |.|    |||..:|..:|:  .|:         .|..:.|.|.||.:.:..:.|.|.....||..
  Rat   536 ELEEFEFLEQREEKDQELQLMHEVSNLKNLIKHAEEYNQDLENELSSKVELLKEKEDQIKELQRY 600

  Fly   599 RLARQAELRRRDLQLLRAERQRRLCEDIISSQRRL----------------IEEGNVDLPDELRE 647
            ..|:::|..:.||..     .....||:..:.|.|                :...|::|.:.:.|
  Rat   601 IDAQKSETTKTDLSY-----SSEATEDLKQAMRTLSDLDTVALDAKRESAFLRSENLELKERINE 660

  Fly   648 L----------YGLYQQEIHA 658
            |          ..:||:::.|
  Rat   661 LSDSCKQMENGIQMYQRQLEA 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif19ANP_996208.1 Motor_domain 35..371 CDD:277568 131/354 (37%)
Kinesin 41..371 CDD:278646 129/348 (37%)
CenpeXP_038959788.1 KISc_CENP_E 6..329 CDD:276825 131/358 (37%)
Smc <334..1057 CDD:224117 70/368 (19%)
Smc 787..1603 CDD:224117
Smc 1320..2167 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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