DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kif19A and Kif1c

DIOPT Version :10

Sequence 1:NP_996208.1 Gene:Kif19A / 41717 FlyBaseID:FBgn0038205 Length:750 Species:Drosophila melanogaster
Sequence 2:NP_665884.2 Gene:Kif1c / 113886 RGDID:70928 Length:1100 Species:Rattus norvegicus


Alignment Length:824 Identity:221/824 - (26%)
Similarity:358/824 - (43%) Gaps:217/824 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VAVRVRP------SMEATERCIEVISGG--SLLYDDGGKSRPRQYSYDHVFREND--------SQ 86
            |||||||      |.:|  :|:..:.|.  |::.....|..|:.:::|:.:..:.        ||
  Rat     8 VAVRVRPFNARETSQDA--KCVVSMQGNTTSIINPKQSKDAPKSFTFDYSYWSHTSVEDPQFASQ 70

  Fly    87 EQVYKTTTAPLVRDVLNGLNAAVFAYGATGSGKTHTMLGPVPRKKPQTSDRAPPTASCDSTDVSS 151
            :|||:.....::.....|.|..:||||.||:||::||:|   |::|...                
  Rat    71 QQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMG---RQEPGQQ---------------- 116

  Fly   152 QDIGLMVRAIEDIFSHI---ESAE-AYSCRVSISYLEIYNELIRDLLNP--GGPLELREDHRGQR 210
               |::.:..||:||.:   :||: :||  |.:||:|||.|.:||||||  .|.|.:|| |....
  Rat   117 ---GIVPQLCEDLFSRVNVNQSAQLSYS--VEVSYMEIYCERVRDLLNPKSRGSLRVRE-HPILG 175

  Fly   211 ITVAGLSEITTSSRKEVVSLLLKGNKARTMEPTAANQTSSRSHALLSIMVQAR-----TPLGT-K 269
            ..|..||::..:|..::..|:..||||||:..|..|:|||||||:.:|:...|     |.|.: |
  Rat   176 PYVQDLSKLAVTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTIVFTQRSHDQLTGLDSEK 240

  Fly   270 QGRLFLTDLAGSERAKKTKNRGKRLQEGAHINRSLLALGNVINGLSG------GARYVNYRDSKL 328
            ..::.|.||||||||..:..||.||:|||:||:||..||.||:.|:.      .:.::.||||.|
  Rat   241 VSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVL 305

  Fly   329 TRLLKEALSGRCKTVMIAHVAPESKHRDETKNTLVYADRANSITTKLQNSVYIDEFKDFPTKHYQ 393
            |.||||.|.|..:|.|||.::|...:.:||.:||.||||    |.:::.:..|:|..:      .
  Rat   306 TWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADR----TKQIRCNAVINEDPN------A 360

  Fly   394 SLVSELRDEVSRLRTKMLTERPRSGA----------------AAAAAAAAASGSAGTAGSG---- 438
            .|:.||::||:|||..::.:...:.|                ||::..|.||.|:....:|    
  Rat   361 RLIRELQEEVARLRELLMAQGLSASALGGLKVEEGSPGGVLPAASSPPAPASPSSPPPHNGELEP 425

  Fly   439 ---------AGSEAVQEQDEQRKTELRYLRE--QIVLTFKQQMKLRRKLLEAE------------ 480
                     .|.|...|:.::.:..:..|.|  :..|...:.:::.|:.|.||            
  Rat   426 SFSPSAEPQIGPEEAMERLQETEKIIAELNETWEEKLRKTEALRMEREALLAEMGVAVREDGGTV 490

  Fly   481 --------SHLLGLELDAERQHMIISHWQG---RIGKLYDAMGDDDIESEGSVALKNAWGELAAI 534
                    .||:.|..|......::.|.:.   |:|::     |.||:..|..            
  Rat   491 GVFSPKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQV-----DVDIKLTGQF------------ 538

  Fly   535 EKETRRYKEIRERTEHELEQCRQKGVKLEDELPERISSDEERELLALL--CRVHE------LEAD 591
                     |||      :.|..:.:...|           .|::..|  |...|      |..:
  Rat   539 ---------IRE------QHCLFRSIPQPD-----------GEVMVTLEPCEGAETYVNGKLVTE 577

  Fly   592 KVSLQAER---LARQAELRRRDLQLLRAERQRRLCE---------DIISSQRRLIEEGNVDLPDE 644
            .:.|::..   :.:....|....:..|.||:|.:..         |...:|:.|:|:..:|:..|
  Rat   578 PLVLKSGNRIVMGKNHVFRFNHPEQARLERERGVPPPPGPPSEPVDWNFAQKELLEQQGIDIKLE 642

  Fly   645 ----LRELYGLYQQEIHAGVVTPSTSNYERKLPPIYTAGSDSPGSSSSSEWSPASPLPQIDNQMD 705
                |::|...|::|.....:...    :::|.....:|.||...|....|...|.|.:      
  Rat   643 MEKRLQDLENQYRKEKEEADLLLE----QQRLYADSDSGEDSDKRSCEESWRLISSLRE------ 697

  Fly   706 PVDRVMGPPVNPRLPRLSAAT---SANVPAGGSRRPSLRVARNP 746
                        :||..:..|   ...:|:.|.||...||.:.|
  Rat   698 ------------QLPPNTVQTIVKRCGLPSSGKRRAPRRVYQIP 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif19ANP_996208.1 Motor_domain 35..371 CDD:473979 137/366 (37%)
SMC_prok_B <393..672 CDD:274008 63/356 (18%)
Kif1cNP_665884.2 KISc_KIF1A_KIF1B 4..355 CDD:276816 138/377 (37%)
Kinesin_assoc 352..522 CDD:465047 33/175 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 398..435 7/36 (19%)
FHA_KIF1C 498..599 CDD:438780 23/143 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 900..924
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 949..1100
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.