DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or88a and Or85e

DIOPT Version :10

Sequence 1:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001262374.1 Gene:Or85e / 41018 FlyBaseID:FBgn0026399 Length:467 Species:Drosophila melanogaster


Alignment Length:426 Identity:90/426 - (21%)
Similarity:153/426 - (35%) Gaps:108/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SMVPFCLSAFLNVLFFGCNGWDIIGHFWLGHPANQNPPV---LSITIYFSIRGL-MLY--LKRKE 103
            |||.| .|..|.|||.... .|::       |..:...:   |::||.:...|. .:|  |:.:.
  Fly    68 SMVIF-TSLHLGVLFTKTT-LDVL-------PTGELQAITDALTMTIIYFFTGYGTIYWCLRSRR 123

  Fly   104 IVEFVNDLDRECPRDLVSQLDMQMDETYRNFWQRYRFIRIYSHLGGPM-FCVVPLALFLLTHEGK 167
            ::.::..::||.....::.:............:.:..:.|.|.|.|.: :.|.||.|.:     :
  Fly   124 LLAYMEHMNREYRHHSLAGVTFVSSHAAFRMSRNFTVVWIMSCLLGVISWGVSPLMLGI-----R 183

  Fly   168 DTPVAQHEQLLGGWLPCGVRKDPNFYLLVWSFDL-------MCTTCGVSFFVT--------FDNL 217
            ..|       |..|.|... ..|..|..|::..|       |....|.|.|||        ||.|
  Fly   184 MLP-------LQCWYPFDA-LGPGTYTAVYATQLFGQIMVGMTFGFGGSLFVTLSLLLLGQFDVL 240

  Fly   218 F---NVMQGHLVMHLGHLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCR--------- 270
            :   ..:..|..:..|......|::.....|.|.||   :|...|..|:....|.|         
  Fly   241 YCSLKNLDAHTKLLGGESVNGLSSLQEELLLGDSKR---ELNQYVLLQEHPTDLLRLSAGRKCPD 302

  Fly   271 ------------------------KYNDIFKVAFLVSNFVGAGSLCFYLFM-LSETSDVLIIA-- 308
                                    :..::|....||.:......||..:|: :|.|.:||.|.  
  Fly   303 QGNAFHNALVECIRLHRFILHCSQELENLFSPYCLVKSLQITFQLCLLVFVGVSGTREVLRIVNQ 367

  Fly   309 -QYI-LPTLVLVGFTFEICLRGTQLEKASEGLESSLRSQE------WYLGSRRYRKFYLLWTQYC 365
             ||: |....|:.||:  |  |..|.:      .|:||.:      |:..:...|:..|::....
  Fly   368 LQYLGLTIFELLMFTY--C--GELLSR------HSIRSGDAFWRGAWWKHAHFIRQDILIFLVNS 422

  Fly   366 QRTQQL--GAFGLIQVNMVHFTEIMQLAYRLFTFLK 399
            :|...:  |.|.::.||.:.  .::..|:...|.|:
  Fly   423 RRAVHVTAGKFYVMDVNRLR--SVITQAFSFLTLLQ 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 77/387 (20%)
Or85eNP_001262374.1 7tm_6 120..449 CDD:251636 70/356 (20%)

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