DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or88a and Or83a

DIOPT Version :9

Sequence 1:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_524234.2 Gene:Or83a / 40648 FlyBaseID:FBgn0037322 Length:453 Species:Drosophila melanogaster


Alignment Length:457 Identity:94/457 - (20%)
Similarity:166/457 - (36%) Gaps:103/457 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FLRPQMFQEVAQMVHFQWRRNPVDNSMVNASMVPFC------LSAFLNVLFFG---CNGWDIIGH 70
            |:|..|.  :|.|..|.:.   |:.|.|.|.:|.||      .:.|::|...|   |..:...|.
  Fly    22 FVRQTMC--IAAMYPFGYY---VNGSGVLAVLVRFCDLTYELFNYFVSVHIAGLYICTIYINYGQ 81

  Fly    71 FWLGHPANQNPPVLSITIYFSIRGLMLYLKR------KEIVEFVNDLDRECPRDLVSQLDMQMDE 129
            ..|....|   .::...||.....:.||.:|      ..|:..:|| :.| .|..|....:.|..
  Fly    82 GDLDFFVN---CLIQTIIYLWTIAMKLYFRRFRPGLLNTILSNIND-EYE-TRSAVGFSFVTMAG 141

  Fly   130 TYR--NFWQRYRFIRIYSHLGGPMFCVVPLALFLLTHEGKDTPVAQHEQL--LGGWLPCGVRKDP 190
            :||  ..|     |:.|      ::|.....:|.|.     .|:|..::.  |..|.|....: |
  Fly   142 SYRMSKLW-----IKTY------VYCCYIGTIFWLA-----LPIAYRDRSLPLACWYPFDYTQ-P 189

  Fly   191 NFYLLVWSFDLM-------------------CTTCGVSFFVTFDNLFNVMQGHLVMHLGHLARQF 236
            ..|.:|:....|                   |......:.|.|.:|.||:....|: :|....:.
  Fly   190 GVYEVVFLLQAMGQIQVAASFASSSGLHMVLCVLISGQYDVLFCSLKNVLASSYVL-MGANMTEL 253

  Fly   237 SAIDPRQSLTDEK--RFFVDLRLLVQRQQLLN-GLCRKYNDIFKVAFL---------------VS 283
            :.:...||..|.:  ::...:......|:||. |....::..|:::|:               :.
  Fly   254 NQLQAEQSAADVEPGQYAYSVEEETPLQELLKVGSSMDFSSAFRLSFVRCIQHHRYIVAALKKIE 318

  Fly   284 N------FVGAGSLCFYLFMLSETSD----------VLIIAQYILPTLVLVGFTFEICLRGTQLE 332
            :      ||..|.:.|.:.:::..|.          ::.:.||:|  |||... |.||.....:.
  Fly   319 SFYSPIWFVKIGEVTFLMCLVAFVSTKSTAANSFMRMVSLGQYLL--LVLYEL-FIICYFADIVF 380

  Fly   333 KASEGLESSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHFTEIMQLAYRLFTF 397
            :.|:....:|....|....:..|..|:.:....:|..||.|..:..:|:..|...:..|:...|.
  Fly   381 QNSQRCGEALWRSPWQRHLKDVRSDYMFFMLNSRRQFQLTAGKISNLNVDRFRGTITTAFSFLTL 445

  Fly   398 LK 399
            |:
  Fly   446 LQ 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 72/379 (19%)
Or83aNP_524234.2 7tm_6 <155..440 CDD:251636 54/294 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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