DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or88a and Or67c

DIOPT Version :9

Sequence 1:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_524018.2 Gene:Or67c / 39189 FlyBaseID:FBgn0036078 Length:404 Species:Drosophila melanogaster


Alignment Length:399 Identity:74/399 - (18%)
Similarity:168/399 - (42%) Gaps:37/399 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QMFQEVAQMVHFQWRRNPVDNSM----VNASMVPFCLSAFLNVLFFGCNGWDIIGHFWLGHPANQ 79
            |.::.:.:.::.....||:.:.:    :.|..:.|.|.....::||    ::.|..|.....|..
  Fly    21 QFYRTIGEDIYAHRSTNPLKSLLFKIYLYAGFINFNLLVIGELVFF----YNSIQDFETIRLAIA 81

  Fly    80 NPPVLSITIYFSIRGLMLYLKRKEIVEFVNDLDRECPRDLVSQLDMQMDETYRNFWQRYRFIRIY 144
            ..|.:..::....:...:...:|.::..::||:...|:.|..|::.::.:..:..   .|.|.|:
  Fly    82 VAPCIGFSLVADFKQAAMIRGKKTLIMLLDDLENMHPKTLAKQMEYKLPDFEKTM---KRVINIF 143

  Fly   145 SHLGGPMFCVVPLALF----------LLTHEGKDTPVAQHEQLLGGWLPC-GVRKDPNFYLLVWS 198
            :.|     |:.....|          .....|.||.......|:  |.|. ..|.:..::::.|.
  Fly   144 TFL-----CLAYTTTFSFYPAIKASVKFNFLGYDTFDRNFGFLI--WFPFDATRNNLIYWIMYWD 201

  Fly   199 FDLMCTTCGVSFFVTFDNLFNVMQGHLVMHLGHLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQQ 263
            ........|::|... |.|..|:...:.||..:::.:... .|..|..|::.....:.::....:
  Fly   202 IAHGAYLAGIAFLCA-DLLLVVVITQICMHFNYISMRLED-HPCNSNEDKENIEFLIGIIRYHDK 264

  Fly   264 LLNGLCRKYNDIFKVAFLVSNFVGAGSLCFYLFMLSE-TSDVLII-AQYILPTLVLVGFTFEICL 326
            .|. ||...||::..:.|::..:.:..:||..|.::| |.:|:|| ..:::.::|.|   |.:|.
  Fly   265 CLK-LCEHVNDLYSFSLLLNFLMASMQICFIAFQVTESTVEVIIIYCIFLMTSMVQV---FMVCY 325

  Fly   327 RGTQLEKASEGLESSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHFTEIMQLA 391
            .|..|..||..:..:..:|:|:..|:.|.....|.....|:...:.......:::|.:.:::.::
  Fly   326 YGDTLIAASLKVGDAAYNQKWFQCSKSYCTMLKLLIMRSQKPASIRPPTFPPISLVTYMKVISMS 390

  Fly   392 YRLFTFLKS 400
            |:.|..|::
  Fly   391 YQFFALLRT 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 61/329 (19%)
Or67cNP_524018.2 7tm_6 86..391 CDD:251636 59/320 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472798
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005297
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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