DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or88a and Or47a

DIOPT Version :9

Sequence 1:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster


Alignment Length:471 Identity:92/471 - (19%)
Similarity:158/471 - (33%) Gaps:170/471 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MEEFLRPQ----------MFQEVAQMVHFQWRRNP--VDNSMVNASMVPFCLSAFLNVLFFGCNG 64
            |:.||:.|          :|.|..:|    |:| |  ..|....|::.||.|:|.|         
  Fly     1 MDSFLQVQKSTIALLGFDLFSENREM----WKR-PYRAMNVFSIAAIFPFILAAVL--------- 51

  Fly    65 WDIIGHFWLGHPANQNPPVLS---ITIYFSIRGL-----MLYLKR-------------------- 101
                 |.|      :|..:|:   :.:..:|.||     :|||:|                    
  Fly    52 -----HNW------KNVLLLADAMVALLITILGLFKFSMILYLRRDFKRLIDKFRLLMSNEAEQG 105

  Fly   102 KEIVEFVNDLDRECPRDLVSQLDMQMDETYRNFWQRYRFIRIYSHLGGPMFCVVP-----LALFL 161
            :|..|.:|..:::         |.:|...:|..:.          |...:..|:|     |:.:|
  Fly   106 EEYAEILNAANKQ---------DQRMCTLFRTCFL----------LAWALNSVLPLVRMGLSYWL 151

  Fly   162 LTHEGKDTPVAQHEQLLGGWLPC----GVRKDPNFYL-LVWSFDLMCTTCGV--------SFFVT 213
            ..|...:.|           .||    .:....|:.| .:||   ...:.||        :.|.:
  Fly   152 AGHAEPELP-----------FPCLFPWNIHIIRNYVLSFIWS---AFASTGVVLPAVSLDTIFCS 202

  Fly   214 F-DNL---FNVMQGHLVMHLGHLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCRKYND 274
            | .||   |.:.|..:|...|...::..|       |..|.|.:        .|....:|...|.
  Fly   203 FTSNLCAFFKIAQYKVVRFKGGSLKESQA-------TLNKVFAL--------YQTSLDMCNDLNQ 252

  Fly   275 IFKVAFLVSNFVGAGSLCF--YLFMLSETSDVLIIAQYILPTLVLVGFTFEICLRGTQLEKASEG 337
            .::.......|:.:..||.  |||.::......:.....:.|:::..:.:  |..|..|:..|..
  Fly   253 CYQPIICAQFFISSLQLCMLGYLFSITFAQTEGVYYASFIATIIIQAYIY--CYCGENLKTESAS 315

  Fly   338 LESSLRSQEWY--LGS----------------RRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHF 384
            .|.::....|:  ||:                |.:|.|.:  |.|           ..:.||..|
  Fly   316 FEWAIYDSPWHESLGAGGASTSICRSLLISMMRAHRGFRI--TGY-----------FFEANMEAF 367

  Fly   385 TEIMQLAYRLFTFLKS 400
            :.|::.|....|.|:|
  Fly   368 SSIVRTAMSYITMLRS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 69/386 (18%)
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 69/381 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465675
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.