Protein Alignment Or88a and Or42b

DIOPT Version :10

• Sequence 1: NP_524348.2
• Gene: Or88a / 41715
• FlyBaseID: FBgn0038203
• Length: 401
• Species: Drosophila melanogaster
• Sequence 2: NP_523624.2
• Gene: Or42b / 35516
• FlyBaseID: FBgn0033043
• Length: 399
• Species: Drosophila melanogaster
• Alignment Length: 179
• Identity: 36/179 - (20%)
• Similarity: 76/179 - (42%)
• Gaps: 15/179 - (8%)

  Fly   228 HLGHLARQFSAIDPRQSLTDEKRF------FVDLRLLVQRQQLLNGLCRKYNDIFKVAFLVSNFV 286
            ||..|..:...:...::|::.:.:      .:|.:|:::...::..:.:  ..||....|:...:
  Fly   218 HLDMLRERIRRLRSDENLSEAESYEELVKCVMDHKLILRYCAIIKPVIQ--GTIFTQFLLIGLVL 280

  Fly   287 GAGSLCFYLFMLSETSDVLI-IAQYILPTLVLVGFTFEICLRGTQLEKASEGLESSLRSQEWYLG 350
            |...:..:.|     ||:.. ||.::....:|:. ||..|.....:.:..|.|..::....|...
  Fly   281 GFTLINVFFF-----SDIWTGIASFMFVITILLQ-TFPFCYTCNLIMEDCESLTHAIFQSNWVDA 339

  Fly   351 SRRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHFTEIMQLAYRLFTFLK 399
            ||||:...|.:.|..|:.....|.|:.|::|.....:.:.|:.:.|..|
  Fly   340 SRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITK 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Or88a	NP_524348.2	7tm_6	75..392	CDD:251636	33/170 (19%)
Or42b	NP_523624.2	7tm_6	76..381	CDD:251636	33/170 (19%)