DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or88a and Or13a

DIOPT Version :9

Sequence 1:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:468 Identity:79/468 - (16%)
Similarity:156/468 - (33%) Gaps:158/468 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TEIKKPYRMEEFLRP-------QMFQEVAQMVHFQ--WRRNPVDNSMVNASMVPFCLSAFLNVLF 59
            ||..:|:|.:..|..       .:...|...:.:|  :..|.:.:.::....   |.:.|:.||.
  Fly    28 TESSRPWRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTEN---CCTTFMGVLN 89

  Fly    60 FGCNGWDIIGHFWLGHPANQNPPVLSITIYFSIRGLMLYLKRKEIVEFV--------------ND 110
            |                               :|.:.|.|.:::..:.:              |:
  Fly    90 F-------------------------------VRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNN 123

  Fly   111 LDRECPRDLVSQLDMQMDETYRNFWQRYRFIRIYSHLGGPMFCVVPLA--LFLLTHEGKDTPV-- 171
            :..||.|.:|         |:.........:.|       |:||:||.  .|....:.::.|.  
  Fly   124 VAAECRRRMV---------TFSIMTSLLACLII-------MYCVLPLVEIFFGPAFDAQNKPFPY 172

  Fly   172 -------AQHEQLLGGWLPCGVRKDPNFYLLVWSFDLMCTTCGVS----------FFVTFDNLFN 219
                   ||     ..|:.         |::.:.|......|.|:          ||:|    :.
  Fly   173 KMIFPYDAQ-----SSWIR---------YVMTYIFTSYAGICVVTTLFAEDTILGFFIT----YT 219

  Fly   220 VMQGHLVMHLGHLARQF--SAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCRKYNDIFKVAFLV 282
            ..|.||:..  .:|..|  |..:..:|:..|:     |:.:|::...:....::..|.|....|.
  Fly   220 CGQFHLLHQ--RIAGLFAGSNAELAESIQLER-----LKRIVEKHNNIISFAKRLEDFFNPILLA 277

  Fly   283 SNFVGAGSLCFYLFMLSETSDVLI--IAQYILPTLVLVGFTFEICLRGTQLEKAS---------- 335
            :..:.:..:|...|.:....::.|  ..::|:.....:...:.:|..|..|.|.|          
  Fly   278 NLMISSVLICMVGFQIVTGKNMFIGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYEC 342

  Fly   336 --EGLE-----------SSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHFTEI 387
              ||.:           ..:|:|.|         |.:|.:   |:..::.||....:::..||.|
  Fly   343 QWEGSDRIEIQSFTPTTKRIRNQIW---------FMILCS---QQPVRITAFKFSTLSLQSFTAI 395

  Fly   388 MQLAYRLFTFLKS 400
            :..:...||.|:|
  Fly   396 LSTSISYFTLLRS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 62/378 (16%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 67/407 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472833
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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