DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or88a and Or9a

DIOPT Version :10

Sequence 1:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_511107.1 Gene:Or9a / 31975 FlyBaseID:FBgn0030204 Length:392 Species:Drosophila melanogaster


Alignment Length:415 Identity:79/415 - (19%)
Similarity:148/415 - (35%) Gaps:113/415 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LNVLFFGCNGWDIIGHFWLGHPANQNPPVLSITI----YFSIRGLMLYLKRKEIVEFVNDLDREC 115
            :.:|.:.|.|.|:    |....||..|.:..:|:    .|.:   .::|...|.:..|:.|....
  Fly    19 VQILVYRCMGIDL----WSPTMANDRPWLTFVTMGPLFLFMV---PMFLAAHEYITQVSLLSDTL 76

  Fly   116 PRDLVSQLDMQMDETYRNF----WQRYRFIRIYSHLGGPMFCVVPLALFLLTHEGKDTPVA---- 172
            .....|.|      |...|    :.|..|:.:..|:..           :|..|.:..|.|    
  Fly    77 GSTFASML------TLVKFLLFCYHRKEFVGLIYHIRA-----------ILAKEIEVWPDAREII 124

  Fly   173 ----QHEQLLG--------------------GWLPCGVRKD------PN------------FYLL 195
                |.:|:|.                    |.:...:|.|      |:            ||:.
  Fly   125 EVENQSDQMLSLTYTRCFGLAGIFAALKPFVGIILSSIRGDEIHLELPHNGVYPYDLQVVMFYVP 189

  Fly   196 VWSFDLMCTTCGVSFFVTFDNL-----FNV-----MQGHLVMHLGHLARQFSAIDPRQSLTDEKR 250
            .:.:::|.:...|:..:..|:|     :||     :..|.::||           |.....:|..
  Fly   190 TYLWNVMASYSAVTMALCVDSLLFFFTYNVCAIFKIAKHRMIHL-----------PAVGGKEELE 243

  Fly   251 FFVDLRLLVQR-QQLLNGLCRKYNDIFKVAFLVSNFVGAGSLCFYLFMLSE----TSDVLIIAQY 310
            ..|.:.||.|: .|:.:.:..||..:..:.|    |:.|..:||..|.:::    ...:..||  
  Fly   244 GLVQVLLLHQKGLQIADHIADKYRPLIFLQF----FLSALQICFIGFQVADLFPNPQSLYFIA-- 302

  Fly   311 ILPTLVLVGFTFEICLRGTQLEKASEGLESSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFG 375
            .:.:|::..|.:..|  |..::.||....:.|....|...|...::..|:.....||..|:..: 
  Fly   303 FVGSLLIALFIYSKC--GENIKSASLDFGNGLYETNWTDFSPPTKRALLIAAMRAQRPCQMKGY- 364

  Fly   376 LIQVNMVHFTEIMQLAYRLFTFLKS 400
            ..:.:|..|:.|::.|......|:|
  Fly   365 FFEASMATFSTIVRSAVSYIMMLRS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 71/385 (18%)
Or9aNP_511107.1 7tm_6 68..381 CDD:251636 64/349 (18%)

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