Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_569047.1 | Gene: | SKIP2 / 836860 | AraportID: | AT5G67250 | Length: | 527 | Species: | Arabidopsis thaliana |
Alignment Length: | 354 | Identity: | 81/354 - (22%) |
---|---|---|---|
Similarity: | 131/354 - (37%) | Gaps: | 100/354 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 269 LQDHAETLV---CVNLFFSCSPGIDTR---EWCRAF---------ENMHNLRTLKLSGNC----- 313
Fly 314 -------HLVLLEAV----LRAVPESAPIRQLDLTGMLSLTNELLL--YVAGK-------WQSTL 358
Fly 359 KVLDLMFC-------VQLNANCIDALRQLSGRLEALTMAYCRELTGTGLLQGLAGDINYS----- 411
Fly 412 --LQELHLEETIFLDESSMCQLLERLPNLRRLSLDNCR-QAVTDRTMATICQYQTRLRNLNIEYC 473
Fly 474 MKITDQGLMGYGDTPYPI----SRLRGLKELNLRGCRNVTDSSL-MVGLKLPELRALSLGYCNRL 533
Fly 534 TSEGFEALTQNCPSLEALCVSSCMAVDDE 562 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | |
leucine-rich repeat | 281..303 | CDD:275381 | 6/33 (18%) | ||
LRR_RI | <297..482 | CDD:238064 | 46/233 (20%) | ||
leucine-rich repeat | 304..330 | CDD:275381 | 11/41 (27%) | ||
leucine-rich repeat | 331..357 | CDD:275381 | 5/34 (15%) | ||
leucine-rich repeat | 358..379 | CDD:275381 | 8/27 (30%) | ||
leucine-rich repeat | 384..409 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 5/24 (21%) | ||
AMN1 | 430..595 | CDD:187754 | 34/139 (24%) | ||
leucine-rich repeat | 438..464 | CDD:275381 | 6/26 (23%) | ||
leucine-rich repeat | 465..496 | CDD:275381 | 5/34 (15%) | ||
leucine-rich repeat | 497..521 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 522..547 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 548..573 | CDD:275381 | 6/15 (40%) | ||
leucine-rich repeat | 574..599 | CDD:275381 | |||
SKIP2 | NP_569047.1 | F-box-like | 45..>73 | CDD:403981 | |
AMN1 | 82..295 | CDD:187754 | 46/202 (23%) | ||
leucine-rich repeat | 106..128 | CDD:275381 | 3/7 (43%) | ||
leucine-rich repeat | 135..160 | CDD:275381 | 6/33 (18%) | ||
leucine-rich repeat | 161..185 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 239..264 | CDD:275381 | 7/24 (29%) | ||
leucine-rich repeat | 265..288 | CDD:275381 | 7/40 (18%) | ||
leucine-rich repeat | 289..314 | CDD:275381 | 5/24 (21%) | ||
AMN1 | <311..>416 | CDD:187754 | 25/116 (22%) | ||
leucine-rich repeat | 315..342 | CDD:275381 | 7/37 (19%) | ||
leucine-rich repeat | 343..367 | CDD:275381 | 4/23 (17%) | ||
leucine-rich repeat | 368..393 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 394..418 | CDD:275381 | 8/24 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13318 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |