Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001032056.1 | Gene: | AT5G51370 / 835211 | AraportID: | AT5G51370 | Length: | 446 | Species: | Arabidopsis thaliana |
Alignment Length: | 503 | Identity: | 109/503 - (21%) |
---|---|---|---|
Similarity: | 188/503 - (37%) | Gaps: | 112/503 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 169 KHLQVRHAPVFRNLDGKLP--NLKVLTIATTMSMDDQHLAAMDDLDMKQFSHLVGFECDGVSLDA 231
Fly 232 VLKMRMLLQLRRTENKVQLRHLQFEFRRNNENALLDVLQDHAETLVCVNLFFSC-----SPGI-- 289
Fly 290 -----------DTREWCRAFENMHNLRTLKLSGNCHLVLLEAVLRAVP-ESAPIRQLDL-----T 337
Fly 338 GMLSLTNELLLYVAGKWQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAYCRELTGTGLLQ 402
Fly 403 GLAGDINYSLQELHLEETIFLDESSMCQLLERLPNLRRLSLDNCRQAVTD-RTMATICQYQTRLR 466
Fly 467 NLNIEYCMKITDQGLMGYGDTPYPISRLRGLKELNLRGCRNVTDSSLMVGL--KLPELRALSLGY 529
Fly 530 CNRLTSEGFEALTQNCPSLEALCVSSCMAVDDETVLNIVSNLKRLRVLNLSNCTKLTLQSIHHIL 594
Fly 595 AHGHNLVQLIACSIDGMDHEQAQRILESQRPQMKQVLLXQERYIHXRS 642 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | |
leucine-rich repeat | 281..303 | CDD:275381 | 8/39 (21%) | ||
LRR_RI | <297..482 | CDD:238064 | 41/191 (21%) | ||
leucine-rich repeat | 304..330 | CDD:275381 | 5/26 (19%) | ||
leucine-rich repeat | 331..357 | CDD:275381 | 5/30 (17%) | ||
leucine-rich repeat | 358..379 | CDD:275381 | 6/20 (30%) | ||
leucine-rich repeat | 384..409 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 4/24 (17%) | ||
AMN1 | 430..595 | CDD:187754 | 37/167 (22%) | ||
leucine-rich repeat | 438..464 | CDD:275381 | 5/26 (19%) | ||
leucine-rich repeat | 465..496 | CDD:275381 | 7/30 (23%) | ||
leucine-rich repeat | 497..521 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 522..547 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 548..573 | CDD:275381 | 2/24 (8%) | ||
leucine-rich repeat | 574..599 | CDD:275381 | 7/24 (29%) | ||
AT5G51370 | NP_001032056.1 | AMN1 | 115..290 | CDD:187754 | 49/231 (21%) |
leucine-rich repeat | 149..175 | CDD:275381 | 7/34 (21%) | ||
leucine-rich repeat | 176..197 | CDD:275381 | 8/35 (23%) | ||
leucine-rich repeat | 198..229 | CDD:275381 | 9/41 (22%) | ||
leucine-rich repeat | 230..254 | CDD:275381 | 5/23 (22%) | ||
leucine-rich repeat | 255..278 | CDD:275381 | 7/30 (23%) | ||
AMN1 | <273..405 | CDD:187754 | 30/132 (23%) | ||
leucine-rich repeat | 279..305 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 306..331 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 357..382 | CDD:275381 | 7/24 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13318 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |