DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12402 and Fbxl15

DIOPT Version :9

Sequence 1:NP_001303481.1 Gene:CG12402 / 41714 FlyBaseID:FBgn0038202 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_001365702.1 Gene:Fbxl15 / 68431 MGIID:1915681 Length:336 Species:Mus musculus


Alignment Length:219 Identity:54/219 - (24%)
Similarity:91/219 - (41%) Gaps:45/219 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 LRQLSGRLEALTMAYCRELTGTGLLQGLAGDINYSLQELHLEETIFLDESSMCQLLERLPNLRRL 441
            ||...| |:.|.:|.|.|                           :|.:..:..:|.|.|.||.:
Mouse   119 LRDAEG-LQELALAPCHE---------------------------WLSDEDLVPVLARNPQLRSV 155

  Fly   442 SLDNCRQAVTDRTMATICQYQTRLRNLNIEYCMKITDQGLMGYGDTPYPISRLRGLKELNLRGCR 506
            :|..|.| ::.|.:..:.:...||:.|::.:|..:....|.|..|      |...|:||:|..||
Mouse   156 ALAGCGQ-LSRRALGALAEGCPRLQRLSLAHCDWVDGLALRGLAD------RCPALEELDLTACR 213

  Fly   507 NVTDSSL--MVGLKLPELRALSLGYCNRLTSEGFEALTQNCPSLEALCVSSCMAVDDETVLNIVS 569
            .:.|.::  :...:...||:|||.....:.....:.|.:|||.||.|.::.|:.|..:.|..:..
Mouse   214 QLKDEAIVYLAQRRGAGLRSLSLAVNANVGDTAVQELARNCPQLEHLDLTGCLRVGSDGVRTLAE 278

  Fly   570 NLKRLRVLNLSNCTKLTLQSIHHI 593
            ....||.|.:.:|        ||:
Mouse   279 YCPALRSLRVRHC--------HHV 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12402NP_001303481.1 F-box 75..117 CDD:279040
leucine-rich repeat 281..303 CDD:275381
LRR_RI <297..482 CDD:238064 22/104 (21%)
leucine-rich repeat 304..330 CDD:275381
leucine-rich repeat 331..357 CDD:275381
leucine-rich repeat 358..379 CDD:275381 1/1 (100%)
leucine-rich repeat 384..409 CDD:275381 5/24 (21%)
leucine-rich repeat 412..437 CDD:275381 3/24 (13%)
AMN1 430..595 CDD:187754 45/166 (27%)
leucine-rich repeat 438..464 CDD:275381 6/25 (24%)
leucine-rich repeat 465..496 CDD:275381 7/30 (23%)
leucine-rich repeat 497..521 CDD:275381 7/25 (28%)
leucine-rich repeat 522..547 CDD:275381 8/24 (33%)
leucine-rich repeat 548..573 CDD:275381 6/24 (25%)
leucine-rich repeat 574..599 CDD:275381 6/20 (30%)
Fbxl15NP_001365702.1 F-box 18..55 CDD:395521
leucine-rich repeat 125..151 CDD:275381 8/52 (15%)
leucine-rich repeat 152..177 CDD:275381 6/25 (24%)
AMN1 <175..>304 CDD:187754 36/134 (27%)
leucine-rich repeat 178..203 CDD:275381 7/30 (23%)
leucine-rich repeat 204..230 CDD:275381 7/25 (28%)
leucine-rich repeat 231..256 CDD:275381 8/24 (33%)
leucine-rich repeat 257..281 CDD:275381 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13318
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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