Protein Alignment CG12402 and FipoQ

DIOPT Version :9

• Sequence 1: NP_001303481.1
• Gene: CG12402 / 41714
• FlyBaseID: FBgn0038202
• Length: 671
• Species: Drosophila melanogaster
• Sequence 2: NP_733291.1
• Gene: FipoQ / 43475
• FlyBaseID: FBgn0039667
• Length: 515
• Species: Drosophila melanogaster
• Alignment Length: 586
• Identity: 130/586 - (22%)
• Similarity: 226/586 - (38%)
• Gaps: 165/586 - (28%)

  Fly    75 IELLPNEMWLEIMSYLSYNDLLQLRMVSWRCRDLVHRRRFMEKGKVIVTQHNLEAIHKHAKGGNC 139
            ||.||:::.|.|.||||:.::.:|..:..|.|.:.:..|..   |.:..:..:..:|.    |:.
  Fly    34 IEKLPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLW---KNVSLRPEVSGLHV----GSL 91

  Fly   140 YLSFERIELRNLRQCRQLENFLRLVGHEVKHLQVRHAPVFRNLDGKLPNL--KVLTIATTMSMDD 202
            .:..:.|.:|.....|.:|..:.|:.|.|.|          .|..|.|||  .:|..:|.|.:.|
  Fly    92 EMLLQLISVRFGPTLRYIELPIELITHTVLH----------ELSAKCPNLTHMLLDFSTAMQLHD 146

  Fly   203 QHLAAMDDLDMKQFSHLVGFECDGVSLDAVLKMR-MLLQLRRTENKVQLRHL--QFEFRRNNENA 264
            ..       :|:.|...:.:.|  |.|..|:.|. .:.::....|.:::.||  .:|.....|..
  Fly   147 FS-------EMQAFPTKLRYMC--VCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEE 202

  Fly   265 LLDVLQDHAETLVCVNLFFSCSPGIDTREWCRAFENMHNLRTLKLSGNCHLVLLEAVLRAVPESA 329
            :.:|:..|.        ..|.:|               |||.:.|.|
  Fly   203 IYEVINVHK--------LKSATP---------------NLRVINLYG------------------ 226

  Fly   330 PIRQLDLTGMLSLTNELLLYVAGKWQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAYCRE 394
             |..:|.:.:.:.::..:         .|:.|.:.||.::..:.:..|.|.|.||..|.|
  Fly   227 -INFIDDSHIDAFSSNCI---------QLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLM----- 276

  Fly   395 LTGTGLLQGLAGDINY---SLQELHLEETIFLDESSMC--QLLERLPNLRRLS---LDNCRQAVT 451
             .||.|.........:   :||||.:..|   |.|:.|  .:|.|:|:|:.||   ::....:|.
  Fly   277 -NGTSLKSEFVMQAEWDKCALQELDITAT---DLSTECLVDMLSRIPSLKFLSAGQINGFNDSVL 337

  Fly   452 DRTMATICQYQTR-LRNLNIEYCMKITDQGLMGYGDTPYPISRLRG--LKELNLRGCRNVTDSSL 513
            .:.|.:   ..|| |.:|:::....|:|:||:.:      |.| :|  |....|.|..::||...
  Fly   338 KQWMES---GTTRSLISLDLDSSDNISDEGLLKF------IQR-QGHQLSACCLSGMPHITDQLW 392

  Fly   514 MVGLKLPELRALSLGYCNRL---TSEG----------FEALTQNCPSLEAL-------------- 551
            |..|.|       ||.|..:   |:|.          .:.:..||.:||.|
  Fly   393 MSILPL-------LGNCKIIVMGTAEKLGVNIHVDQLMDTIASNCGNLERLELRWDPDNLRFSDK 450

  Fly   552 -----------CVS-SCMAVDD----ETVLNIVSNLKRLRVLNLSNCTKLTLQSIHHILAHGHNL 600
                       |:. .||.:.|    |||........|:.|:..:.|.::   |.:|:|.:.::|
  Fly   451 SQKAIDILRVKCLKLRCMVLSDGRYYETVKANFERADRITVVRTTTCCRV---SPYHLLRNYNDL 512

  Fly   601 V 601
            :
  Fly   513 I 513

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12402	NP_001303481.1	F-box	75..117	CDD:279040	14/41 (34%)
		leucine-rich repeat	281..303	CDD:275381	2/21 (10%)
		LRR_RI	<297..482	CDD:238064	44/193 (23%)
		leucine-rich repeat	304..330	CDD:275381	4/25 (16%)
		leucine-rich repeat	331..357	CDD:275381	2/25 (8%)
		leucine-rich repeat	358..379	CDD:275381	5/20 (25%)
		leucine-rich repeat	384..409	CDD:275381	6/24 (25%)
		leucine-rich repeat	412..437	CDD:275381	10/26 (38%)
		AMN1	430..595	CDD:187754	49/213 (23%)
		leucine-rich repeat	438..464	CDD:275381	5/28 (18%)
		leucine-rich repeat	465..496	CDD:275381	8/30 (27%)
		leucine-rich repeat	497..521	CDD:275381	8/23 (35%)
		leucine-rich repeat	522..547	CDD:275381	7/37 (19%)
		leucine-rich repeat	548..573	CDD:275381	10/54 (19%)
		leucine-rich repeat	574..599	CDD:275381	5/24 (21%)
FipoQ	NP_733291.1	F-box-like	34..80	CDD:289689	15/48 (31%)
		leucine-rich repeat	131..156	CDD:275381	7/31 (23%)
		leucine-rich repeat	157..175	CDD:275381	5/19 (26%)
		leucine-rich repeat	219..244	CDD:275381	6/52 (12%)
		leucine-rich repeat	245..270	CDD:275381	7/24 (29%)
		leucine-rich repeat	271..295	CDD:275381	6/29 (21%)
		leucine-rich repeat	296..320	CDD:275381	10/26 (38%)
		leucine-rich repeat	321..348	CDD:275381	6/29 (21%)
		leucine-rich repeat	349..375	CDD:275381	9/32 (28%)
		leucine-rich repeat	376..403	CDD:275381	10/33 (30%)
		leucine-rich repeat	405..432	CDD:275381	4/26 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45457989
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.830