DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12402 and fbxl15

DIOPT Version :9

Sequence 1:NP_001303481.1 Gene:CG12402 / 41714 FlyBaseID:FBgn0038202 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_998107.1 Gene:fbxl15 / 405878 ZFINID:ZDB-GENE-040426-2440 Length:296 Species:Danio rerio


Alignment Length:272 Identity:60/272 - (22%)
Similarity:107/272 - (39%) Gaps:68/272 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 WQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAY---CREL----TGTGLLQGLAGDINYS 411
            |:..|  :..:|| .|....:.:|:::|....:|...|   ||..    ||.             
Zfish    21 WEDVL--VSHVFC-HLPLRLLVSLQRVSKSFRSLIQVYLDNCRTFDPAQTGP------------- 69

  Fly   412 LQELHLEETIFLDESSMCQLLERLPNLRRLSLDNCRQAVTD------------------------ 452
                |:....|      |.:|.....|:.||:.||...:||                        
Zfish    70 ----HIPREAF------CSILRHNQVLQHLSVTNCSDWITDTDLLPVIGQNQQLQHVDLRGCAQL 124

  Fly   453 --RTMATICQYQTRLRNLNIEYCMKITDQGLMGYGDTPYPISRLRGLKELNLRGCRNVTDSSL-- 513
              |.:..:.....||::|::.:|..:....|....| ..|:     |:.|:|..||.:.|.::  
Zfish   125 SRRALVAVSLSCPRLQHLSLAHCEWVDSLALRSLAD-HCPM-----LRSLDLTACRQLKDPAVCY 183

  Fly   514 MVGLKLPELRALSLGYCNRLTSEGFEALTQNCPSLEALCVSSCMAVDDETVLNIVSNLKRLRVLN 578
            :.| |.|||||||:.....:|....|.:.:.|..:|.|.::.|:.|.:|.:..:.....:|:.|.
Zfish   184 LAG-KCPELRALSVAVNANITDTAVEEVAKKCREMERLDLTGCLRVRNEAIRTLAEYCPKLQSLK 247

  Fly   579 LSNCTKLTLQSI 590
            :::|..:|..|:
Zfish   248 VNHCHNVTESSL 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12402NP_001303481.1 F-box 75..117 CDD:279040
leucine-rich repeat 281..303 CDD:275381
LRR_RI <297..482 CDD:238064 29/160 (18%)
leucine-rich repeat 304..330 CDD:275381
leucine-rich repeat 331..357 CDD:275381 1/2 (50%)
leucine-rich repeat 358..379 CDD:275381 5/20 (25%)
leucine-rich repeat 384..409 CDD:275381 6/31 (19%)
leucine-rich repeat 412..437 CDD:275381 4/24 (17%)
AMN1 430..595 CDD:187754 44/189 (23%)
leucine-rich repeat 438..464 CDD:275381 8/51 (16%)
leucine-rich repeat 465..496 CDD:275381 6/30 (20%)
leucine-rich repeat 497..521 CDD:275381 8/25 (32%)
leucine-rich repeat 522..547 CDD:275381 8/24 (33%)
leucine-rich repeat 548..573 CDD:275381 5/24 (21%)
leucine-rich repeat 574..599 CDD:275381 5/17 (29%)
fbxl15NP_998107.1 F-box 16..>52 CDD:279040 7/33 (21%)
leucine-rich repeat 51..85 CDD:275381 10/56 (18%)
leucine-rich repeat 86..112 CDD:275381 7/25 (28%)
AMN1 <111..272 CDD:187754 36/156 (23%)
leucine-rich repeat 113..138 CDD:275381 1/24 (4%)
LRR 1 138..159 5/20 (25%)
leucine-rich repeat 139..164 CDD:275381 5/25 (20%)
LRR 2 164..185 6/25 (24%)
leucine-rich repeat 165..190 CDD:275381 8/25 (32%)
LRR 3 190..211 8/20 (40%)
leucine-rich repeat 191..216 CDD:275381 8/24 (33%)
LRR 4 216..237 5/20 (25%)
leucine-rich repeat 217..242 CDD:275381 5/24 (21%)
LRR 5 242..263 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13318
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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