DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12402 and fbxl15

DIOPT Version :10

Sequence 1:NP_001303481.1 Gene:CG12402 / 41714 FlyBaseID:FBgn0038202 Length:671 Species:Drosophila melanogaster
Sequence 2:XP_073773629.1 Gene:fbxl15 / 405878 ZFINID:ZDB-GENE-040426-2440 Length:335 Species:Danio rerio


Alignment Length:272 Identity:60/272 - (22%)
Similarity:107/272 - (39%) Gaps:68/272 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 WQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAY---CREL----TGTGLLQGLAGDINYS 411
            |:..|  :..:|| .|....:.:|:::|....:|...|   ||..    ||.             
Zfish    60 WEDVL--VSHVFC-HLPLRLLVSLQRVSKSFRSLIQVYLDNCRTFDPAQTGP------------- 108

  Fly   412 LQELHLEETIFLDESSMCQLLERLPNLRRLSLDNCRQAVTD------------------------ 452
                |:....|      |.:|.....|:.||:.||...:||                        
Zfish   109 ----HIPREAF------CSILRHNQVLQHLSVTNCSDWITDTDLLPVIGQNQQLQHVDLRGCAQL 163

  Fly   453 --RTMATICQYQTRLRNLNIEYCMKITDQGLMGYGDTPYPISRLRGLKELNLRGCRNVTDSSL-- 513
              |.:..:.....||::|::.:|..:....|....| ..|:     |:.|:|..||.:.|.::  
Zfish   164 SRRALVAVSLSCPRLQHLSLAHCEWVDSLALRSLAD-HCPM-----LRSLDLTACRQLKDPAVCY 222

  Fly   514 MVGLKLPELRALSLGYCNRLTSEGFEALTQNCPSLEALCVSSCMAVDDETVLNIVSNLKRLRVLN 578
            :.| |.|||||||:.....:|....|.:.:.|..:|.|.::.|:.|.:|.:..:.....:|:.|.
Zfish   223 LAG-KCPELRALSVAVNANITDTAVEEVAKKCREMERLDLTGCLRVRNEAIRTLAEYCPKLQSLK 286

  Fly   579 LSNCTKLTLQSI 590
            :::|..:|..|:
Zfish   287 VNHCHNVTESSL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12402NP_001303481.1 F-box 75..117 CDD:425796
leucine-rich repeat 281..303 CDD:275381
PPP1R42 <297..482 CDD:455733 29/160 (18%)
leucine-rich repeat 304..330 CDD:275381
leucine-rich repeat 331..357 CDD:275381 1/2 (50%)
leucine-rich repeat 358..379 CDD:275381 5/20 (25%)
leucine-rich repeat 384..409 CDD:275381 6/31 (19%)
leucine-rich repeat 412..437 CDD:275381 4/24 (17%)
AMN1 430..595 CDD:187754 44/189 (23%)
leucine-rich repeat 438..464 CDD:275381 8/51 (16%)
leucine-rich repeat 465..496 CDD:275381 6/30 (20%)
leucine-rich repeat 497..521 CDD:275381 8/25 (32%)
leucine-rich repeat 522..547 CDD:275381 8/24 (33%)
leucine-rich repeat 548..573 CDD:275381 5/24 (21%)
leucine-rich repeat 574..599 CDD:275381 5/17 (29%)
fbxl15XP_073773629.1 None
Blue background indicates that the domain is not in the aligned region.

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