| Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
| Alignment Length: | 434 | Identity: | 98/434 - (22%) |
|---|---|---|---|
| Similarity: | 146/434 - (33%) | Gaps: | 156/434 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 257 FRRNNENALLDVLQ-DHAETL-----VCVNLFFSCSPGIDTREWCRAFENMHNLRTLKLSGNCHL 315
Fly 316 VLLEAVLRAV------------PESAP--------IRQLDLTGMLSLTNELLLYVAGKWQSTLKV 360
Fly 361 LDLMFCVQLNANCIDALRQLSGRLEALTMAYCRELTGTGLLQGLAGDINYSLQELHLEETIFLDE 425
Fly 426 SSMCQLLERLPNLRRLSLDNCRQAVTDRTMATICQYQTRLRNLNIEYCMKITDQGLMGYGDTPYP 490
Fly 491 ISRLRGLKELNLRGCRNVTDSSLMVGL--KLPELRALSLGYCNRLTSEGFEALTQNCPSLEALCV 553
Fly 554 SSCMAVDDETVLNIVSNLKRLRVLNLSNC-----TK-LTLQSIHHILAHGHNLVQLIACSIDGMD 612
Fly 613 HEQAQRILESQRPQMKQVLLXQERYIHXR-SR---NTPHHNDWG 652 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | |
| leucine-rich repeat | 281..303 | CDD:275381 | 6/21 (29%) | ||
| LRR_RI | <297..482 | CDD:238064 | 36/204 (18%) | ||
| leucine-rich repeat | 304..330 | CDD:275381 | 6/37 (16%) | ||
| leucine-rich repeat | 331..357 | CDD:275381 | 8/25 (32%) | ||
| leucine-rich repeat | 358..379 | CDD:275381 | 1/20 (5%) | ||
| leucine-rich repeat | 384..409 | CDD:275381 | 3/24 (13%) | ||
| leucine-rich repeat | 412..437 | CDD:275381 | 4/24 (17%) | ||
| AMN1 | 430..595 | CDD:187754 | 40/172 (23%) | ||
| leucine-rich repeat | 438..464 | CDD:275381 | 3/25 (12%) | ||
| leucine-rich repeat | 465..496 | CDD:275381 | 8/30 (27%) | ||
| leucine-rich repeat | 497..521 | CDD:275381 | 9/25 (36%) | ||
| leucine-rich repeat | 522..547 | CDD:275381 | 7/24 (29%) | ||
| leucine-rich repeat | 548..573 | CDD:275381 | 2/24 (8%) | ||
| leucine-rich repeat | 574..599 | CDD:275381 | 8/30 (27%) | ||
| Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 15/47 (32%) |
| leucine-rich repeat | 302..327 | CDD:275381 | 4/24 (17%) | ||
| AMN1 | 309..480 | CDD:187754 | 52/262 (20%) | ||
| leucine-rich repeat | 328..352 | CDD:275381 | 11/62 (18%) | ||
| leucine-rich repeat | 353..376 | CDD:275381 | 6/41 (15%) | ||
| leucine-rich repeat | 377..402 | CDD:275381 | 3/25 (12%) | ||
| leucine-rich repeat | 403..428 | CDD:275381 | 8/30 (27%) | ||
| leucine-rich repeat | 429..455 | CDD:275381 | 9/25 (36%) | ||
| leucine-rich repeat | 456..480 | CDD:275381 | 9/50 (18%) | ||
| leucine-rich repeat | 481..500 | CDD:275381 | 6/18 (33%) | ||
| leucine-rich repeat | 506..529 | CDD:275381 | 8/22 (36%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C45458002 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.930 | |||||