Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102239.1 | Gene: | Fbxl22 / 363083 | RGDID: | 1311830 | Length: | 236 | Species: | Rattus norvegicus |
Alignment Length: | 239 | Identity: | 56/239 - (23%) |
---|---|---|---|
Similarity: | 89/239 - (37%) | Gaps: | 73/239 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 364 MFCVQLNANCIDALRQLSGRLEALTMAYCRELTGTGLLQGLAGDINYSLQELHLEETIFLDESSM 428
Fly 429 CQLLERLPNLRRLSLDNCRQAVTDRTMATICQYQTRLRNLNIEYCMKITDQGLMGYGDTPYPISR 493
Fly 494 LRGL--KELNLRGCRNVTDSSLMVGLKLPELRALSLGYCNRLTSEGFEALTQNCPSLEALCVSSC 556
Fly 557 MAVDDETVLNIVSNLKRLRVLNLSNCTKLTLQSIHHILAHGHNL 600 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | |
leucine-rich repeat | 281..303 | CDD:275381 | |||
LRR_RI | <297..482 | CDD:238064 | 27/117 (23%) | ||
leucine-rich repeat | 304..330 | CDD:275381 | |||
leucine-rich repeat | 331..357 | CDD:275381 | |||
leucine-rich repeat | 358..379 | CDD:275381 | 6/14 (43%) | ||
leucine-rich repeat | 384..409 | CDD:275381 | 3/24 (13%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 3/24 (13%) | ||
AMN1 | 430..595 | CDD:187754 | 40/166 (24%) | ||
leucine-rich repeat | 438..464 | CDD:275381 | 8/25 (32%) | ||
leucine-rich repeat | 465..496 | CDD:275381 | 4/30 (13%) | ||
leucine-rich repeat | 497..521 | CDD:275381 | 6/25 (24%) | ||
leucine-rich repeat | 522..547 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 548..573 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 574..599 | CDD:275381 | 10/24 (42%) | ||
Fbxl22 | NP_001102239.1 | F-box-like | 3..43 | CDD:403981 | 11/62 (18%) |
AMN1 | 44..>191 | CDD:187754 | 44/173 (25%) | ||
leucine-rich repeat | 116..141 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 142..167 | CDD:275381 | 10/24 (42%) | ||
leucine-rich repeat | 168..193 | CDD:275381 | 1/1 (100%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |