Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001005563.1 | Gene: | Fbxl6 / 362941 | RGDID: | 1359687 | Length: | 535 | Species: | Rattus norvegicus |
Alignment Length: | 363 | Identity: | 80/363 - (22%) |
---|---|---|---|
Similarity: | 128/363 - (35%) | Gaps: | 78/363 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 269 LQDHAETLVCVNLFFSCSPGIDTREWC--RAFENMHNLRTLKLSGNCHLVLLEAVLRAVPESAPI 331
Fly 332 RQLDLTGMLSLTNELLLYVAGKWQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAYCRELT 396
Fly 397 GTGLLQGLAGDINYSLQELHLEETIFLDESSM----------CQLLERL---------------- 435
Fly 436 ------PNLRRLSL--DNCRQAVTDRTMATICQYQTRLRNLNIEYCMKITDQGLMGYGDTPYPIS 492
Fly 493 RLRGLKELNLRGCRN----VTDSSLMVGLK----LPELRALSLGYCNRLTSEG---FEALTQNCP 546
Fly 547 SLEALCVSSCMA--VDDETVLNIVSNLKRLRVLNLSNC 582 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | |
leucine-rich repeat | 281..303 | CDD:275381 | 3/23 (13%) | ||
LRR_RI | <297..482 | CDD:238064 | 46/218 (21%) | ||
leucine-rich repeat | 304..330 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 331..357 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 358..379 | CDD:275381 | 5/20 (25%) | ||
leucine-rich repeat | 384..409 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 6/56 (11%) | ||
AMN1 | 430..595 | CDD:187754 | 44/190 (23%) | ||
leucine-rich repeat | 438..464 | CDD:275381 | 5/27 (19%) | ||
leucine-rich repeat | 465..496 | CDD:275381 | 10/30 (33%) | ||
leucine-rich repeat | 497..521 | CDD:275381 | 8/31 (26%) | ||
leucine-rich repeat | 522..547 | CDD:275381 | 4/27 (15%) | ||
leucine-rich repeat | 548..573 | CDD:275381 | 7/26 (27%) | ||
leucine-rich repeat | 574..599 | CDD:275381 | 5/9 (56%) | ||
Fbxl6 | NP_001005563.1 | F-box-like | 105..155 | CDD:289689 | |
AMN1 | 171..390 | CDD:187754 | 47/239 (20%) | ||
leucine-rich repeat | 188..213 | CDD:275381 | 6/25 (24%) | ||
leucine-rich repeat | 214..239 | CDD:275381 | 7/28 (25%) | ||
leucine-rich repeat | 240..291 | CDD:275381 | 12/52 (23%) | ||
leucine-rich repeat | 292..321 | CDD:275381 | 4/28 (14%) | ||
leucine-rich repeat | 322..349 | CDD:275381 | 2/26 (8%) | ||
AMN1 | <349..500 | CDD:187754 | 40/159 (25%) | ||
leucine-rich repeat | 350..377 | CDD:275381 | 5/27 (19%) | ||
leucine-rich repeat | 378..401 | CDD:275381 | 9/27 (33%) | ||
leucine-rich repeat | 434..466 | CDD:275381 | 7/33 (21%) | ||
leucine-rich repeat | 467..491 | CDD:275381 | 6/23 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |