Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038939705.1 | Gene: | Fbxl17 / 316663 | RGDID: | 1309773 | Length: | 739 | Species: | Rattus norvegicus |
Alignment Length: | 331 | Identity: | 72/331 - (21%) |
---|---|---|---|
Similarity: | 154/331 - (46%) | Gaps: | 50/331 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 312 NCHLVLLEAVLRAVPESAP-IRQLDLTGMLSLTNELLL--------YVAGKWQSTLKVLDLMFCV 367
Fly 368 QLNANCIDALRQLSGRLEALTMAYCRELTGTGLLQGLAGDINYSLQELHLEETIFLDESSMCQLL 432
Fly 433 ERLPNLRRLSLDNCRQAVTDRTMATICQYQTRLRNLNIEYCMKITDQGLMGYGDTPYPISRLRGL 497
Fly 498 KELNLRGCRNVTDSSLMVGLK-LPELRALSLGYCNRLTSEGFEALTQNCPSLEALCVSSCMAVDD 561
Fly 562 ETVLNIVSNLKRLRVLNLSNCTKLTLQSIHHILAHGHNLVQLIACSIDGMDHEQAQRILESQRPQ 626
Fly 627 MKQVLL 632 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | |
leucine-rich repeat | 281..303 | CDD:275381 | |||
LRR_RI | <297..482 | CDD:238064 | 40/178 (22%) | ||
leucine-rich repeat | 304..330 | CDD:275381 | 4/17 (24%) | ||
leucine-rich repeat | 331..357 | CDD:275381 | 8/33 (24%) | ||
leucine-rich repeat | 358..379 | CDD:275381 | 5/20 (25%) | ||
leucine-rich repeat | 384..409 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 4/24 (17%) | ||
AMN1 | 430..595 | CDD:187754 | 38/165 (23%) | ||
leucine-rich repeat | 438..464 | CDD:275381 | 5/25 (20%) | ||
leucine-rich repeat | 465..496 | CDD:275381 | 8/30 (27%) | ||
leucine-rich repeat | 497..521 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 522..547 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 548..573 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 574..599 | CDD:275381 | 6/24 (25%) | ||
Fbxl17 | XP_038939705.1 | F-box-like | 316..361 | CDD:403981 | 12/46 (26%) |
leucine-rich repeat | 357..382 | CDD:275381 | 9/44 (20%) | ||
leucine-rich repeat | 383..408 | CDD:275381 | 4/24 (17%) | ||
AMN1 | 406..568 | CDD:187754 | 40/170 (24%) | ||
leucine-rich repeat | 409..434 | CDD:275381 | 5/25 (20%) | ||
leucine-rich repeat | 435..460 | CDD:275381 | 8/30 (27%) | ||
leucine-rich repeat | 461..486 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 487..512 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 513..536 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 537..562 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 563..588 | CDD:275381 | 3/25 (12%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |