Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001265645.1 | Gene: | FBXL4 / 26235 | HGNCID: | 13601 | Length: | 621 | Species: | Homo sapiens |
Alignment Length: | 540 | Identity: | 114/540 - (21%) |
---|---|---|---|
Similarity: | 208/540 - (38%) | Gaps: | 137/540 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 120 VIVTQHNLEAIHKHAKGGNCYLSFERIELR------------NLRQCRQLE----------NFLR 162
Fly 163 LVGHEVKHLQVRHAPVFRNLDG-KLPNLK---VLTIATTMSMDDQHLAAMDDLDMKQFSHLVGFE 223
Fly 224 CDGVSLDAVLKMRMLLQLRRTENKVQLRHLQFEFRRNNENALLDVLQDHAETLVCVNLFFSCSPG 288
Fly 289 IDTREWCRAFENMH-NLR---------TLK-LSGNCHLVLLEAVLRAVPESAPIRQLDLT----- 337
Fly 338 GMLSLTN-ELLLYVAGKWQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAYCRELTGTGLL 401
Fly 402 QGLAGDINYSLQELHLEETIFLDESSMCQLLERLPNLRRLSLDNCRQAVTDRTMATICQYQTRLR 466
Fly 467 NLNIEYCMKITD----QGLMGYGDTPYPISRLRGLKELNLRGCRNVTDSSLM-VGLKLPELRALS 526
Fly 527 LGYCNRLTSEG--FEALTQNCPSLEALCVSSCMAVDDETVLNIVSNLKRLRVLNLSNCTKLTLQS 589
Fly 590 IHHIL--AHGHNLVQLIACS 607 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | |
leucine-rich repeat | 281..303 | CDD:275381 | 4/22 (18%) | ||
LRR_RI | <297..482 | CDD:238064 | 41/205 (20%) | ||
leucine-rich repeat | 304..330 | CDD:275381 | 6/35 (17%) | ||
leucine-rich repeat | 331..357 | CDD:275381 | 7/31 (23%) | ||
leucine-rich repeat | 358..379 | CDD:275381 | 6/20 (30%) | ||
leucine-rich repeat | 384..409 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 1/24 (4%) | ||
AMN1 | 430..595 | CDD:187754 | 41/173 (24%) | ||
leucine-rich repeat | 438..464 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 465..496 | CDD:275381 | 6/34 (18%) | ||
leucine-rich repeat | 497..521 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 522..547 | CDD:275381 | 9/26 (35%) | ||
leucine-rich repeat | 548..573 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 574..599 | CDD:275381 | 4/26 (15%) | ||
FBXL4 | NP_001265645.1 | F-box-like | 280..318 | CDD:315592 | 7/47 (15%) |
leucine-rich repeat | 295..317 | CDD:275381 | 3/23 (13%) | ||
leucine-rich repeat | 318..346 | CDD:275381 | 6/27 (22%) | ||
leucine-rich repeat | 347..376 | CDD:275381 | 8/46 (17%) | ||
LRR 1 | 376..397 | 6/20 (30%) | |||
leucine-rich repeat | 377..398 | CDD:275381 | 6/20 (30%) | ||
AMN1 | 394..601 | CDD:332986 | 50/242 (21%) | ||
LRR 2 | 402..421 | 5/26 (19%) | |||
leucine-rich repeat | 403..427 | CDD:275381 | 7/52 (13%) | ||
LRR 3 | 427..448 | 7/22 (32%) | |||
leucine-rich repeat | 428..452 | CDD:275381 | 7/25 (28%) | ||
LRR 4 | 452..474 | 5/21 (24%) | |||
leucine-rich repeat | 453..480 | CDD:275381 | 6/34 (18%) | ||
LRR 5 | 480..501 | 6/20 (30%) | |||
leucine-rich repeat | 481..506 | CDD:275381 | 6/24 (25%) | ||
LRR 6 | 504..524 | 8/19 (42%) | |||
leucine-rich repeat | 507..534 | CDD:275381 | 9/26 (35%) | ||
LRR 7 | 532..558 | 5/25 (20%) | |||
leucine-rich repeat | 535..560 | CDD:275381 | 5/24 (21%) | ||
LRR 8 | 559..583 | 5/23 (22%) | |||
leucine-rich repeat | 561..586 | CDD:275381 | 4/24 (17%) | ||
LRR 9 | 584..609 | 3/13 (23%) | |||
leucine-rich repeat | 587..612 | CDD:275381 | 3/10 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165152301 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |