DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12402 and FBXL13

DIOPT Version :9

Sequence 1:NP_001303481.1 Gene:CG12402 / 41714 FlyBaseID:FBgn0038202 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_001381423.1 Gene:FBXL13 / 222235 HGNCID:21658 Length:825 Species:Homo sapiens


Alignment Length:646 Identity:138/646 - (21%)
Similarity:253/646 - (39%) Gaps:136/646 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TSGKPSQRREKRLFERLSCSYAQTPNRMELNLNPLLAIARSIAAPPTPPPTPEKLDSD---KDKE 68
            |:...|:::|..|..:......:..||:         |.:..||..:  ..||:..|:   .|: 
Human   187 TARHKSKKKEDELILKHELQLKKWKNRL---------ILKRAAAEES--NFPERSSSEVFLVDE- 239

  Fly    69 GSSKAAIELLPNEMWLEIMSYLSYNDLLQLRMVS------------WRCRDLVHRRRFMEKGKVI 121
             :.|..|.|||....|:|..|||..|::....|:            |...|      |.....||
Human   240 -TLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAID------FSSVKNVI 297

  Fly   122 VTQHNLEAIHKHAKGGNCYLSFERIELRNLRQCRQLENFLRLVGH--EVKHLQVRHAPVF----- 179
            ..::.:..:.:..      |:..|:   |.|.|.......|.|.|  .::.|.|...|.|     
Human   298 PDKYIVSTLQRWR------LNVLRL---NFRGCLLRPKTFRSVSHCRNLQELNVSDCPTFTDESM 353

  Fly   180 RNLDGKLP-----NLKVLTIAT-TMSMDDQHLAAMDDLDM--------KQFSHL-VGFECDGVSL 229
            |::....|     ||...||.. ||.:..:|...:.:|.:        |...:| :|..|.    
Human   354 RHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQNLSLAYCRRFTDKGLQYLNLGNGCH---- 414

  Fly   230 DAVLKMRMLLQLRRTENKVQLRHLQFEFRRNNENALLDVLQDHAETLV--CVN-LFFSCSPGIDT 291
                |:..|.....|:..||    .|.:..|:...::.:..:...||.  ||. |...||     
Human   415 ----KLIYLDLSGCTQISVQ----GFRYIANSCTGIMHLTINDMPTLTDNCVKALVEKCS----- 466

  Fly   292 REWCRAFENMHNLRTLKLSGNCHLVLLEAVLRAVPESAPIRQLDLTGMLSLTNELLLYVAGKWQS 356
                       .:.:|..:|..|  :.:...||: .:..:|::...|...:|:....::...:.:
Human   467 -----------RITSLVFTGAPH--ISDCTFRAL-SACKLRKIRFEGNKRVTDASFKFIDKNYPN 517

  Fly   357 TLKVLDLMFCVQLNANCIDALRQLS--GRLEALTMAYCRELTGTGLLQGLAGDINYSLQELHLEE 419
                |..::..........:||.||  .:|..|.:|.|..:...||.|.|.|..:..::||:|..
Human   518 ----LSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSN 578

  Fly   420 TIFLDESSMCQLLERLPNLRRLSLDNCRQA-----------------------VTDRTMATICQY 461
            .:.|.::|:.:|.||.|||..|||.||...                       :::..:..:.::
Human   579 CVRLSDASVMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGLNVLSRH 643

  Fly   462 QTRLRNLNIEYCMKITDQGLMGYGDTPYPISRLRGLKELNLRGCRNVTDSSL-MVGLKLPELRAL 525
            : :|:.|::..|.:|||.|:..:..:...      |:.|::..|..::|..: .:.:....|.:|
Human   644 K-KLKELSVSECYRITDDGIQAFCKSSLI------LEHLDVSYCSQLSDMIIKALAIYCINLTSL 701

  Fly   526 SLGYCNRLTSEGFEALTQNCPSLEALCVSSCMAVDDETVLNIVSNLKRLRVLNLSNCTKLT 586
            |:..|.::|....|.|:..|..|..|.:|.|:.:.|:.:.::....|:||:|.:..||.::
Human   702 SIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQLRILKMQYCTNIS 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12402NP_001303481.1 F-box 75..117 CDD:279040 14/53 (26%)
leucine-rich repeat 281..303 CDD:275381 3/21 (14%)
LRR_RI <297..482 CDD:238064 45/209 (22%)
leucine-rich repeat 304..330 CDD:275381 5/25 (20%)
leucine-rich repeat 331..357 CDD:275381 3/25 (12%)
leucine-rich repeat 358..379 CDD:275381 2/20 (10%)
leucine-rich repeat 384..409 CDD:275381 9/24 (38%)
leucine-rich repeat 412..437 CDD:275381 8/24 (33%)
AMN1 430..595 CDD:187754 41/181 (23%)
leucine-rich repeat 438..464 CDD:275381 6/48 (13%)
leucine-rich repeat 465..496 CDD:275381 7/30 (23%)
leucine-rich repeat 497..521 CDD:275381 4/24 (17%)
leucine-rich repeat 522..547 CDD:275381 8/24 (33%)
leucine-rich repeat 548..573 CDD:275381 5/24 (21%)
leucine-rich repeat 574..599 CDD:275381 5/13 (38%)
FBXL13NP_001381423.1 Sfi1 <112..>224 CDD:400658 9/45 (20%)
F-box-like 245..289 CDD:403981 12/43 (28%)
leucine-rich repeat 285..312 CDD:275381 5/38 (13%)
AMN1 312..497 CDD:187754 45/218 (21%)
leucine-rich repeat 313..336 CDD:275381 7/25 (28%)
leucine-rich repeat 337..362 CDD:275381 5/24 (21%)
leucine-rich repeat 363..387 CDD:275381 7/23 (30%)
leucine-rich repeat 388..406 CDD:275381 2/17 (12%)
leucine-rich repeat 416..441 CDD:275381 6/28 (21%)
leucine-rich repeat 442..491 CDD:275381 12/67 (18%)
leucine-rich repeat 468..490 CDD:275381 5/24 (21%)
leucine-rich repeat 492..515 CDD:275381 3/22 (14%)
leucine-rich repeat 518..542 CDD:275381 5/23 (22%)
AMN1 529..737 CDD:187754 52/214 (24%)
leucine-rich repeat 543..570 CDD:275381 9/26 (35%)
leucine-rich repeat 571..596 CDD:275381 8/24 (33%)
leucine-rich repeat 597..645 CDD:275381 6/48 (13%)
leucine-rich repeat 646..671 CDD:275381 7/24 (29%)
leucine-rich repeat 672..697 CDD:275381 4/24 (17%)
leucine-rich repeat 698..723 CDD:275381 8/24 (33%)
leucine-rich repeat 724..749 CDD:275381 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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