Sequence 1: | NP_001303481.1 | Gene: | CG12402 / 41714 | FlyBaseID: | FBgn0038202 | Length: | 671 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001364580.1 | Gene: | T01E8.1 / 174584 | WormBaseID: | WBGene00011331 | Length: | 516 | Species: | Caenorhabditis elegans |
Alignment Length: | 525 | Identity: | 109/525 - (20%) |
---|---|---|---|
Similarity: | 183/525 - (34%) | Gaps: | 160/525 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 LPNEMWLEIMSYLSYNDLLQLRMVSWRCRDLVH-RRRFMEKGKVIVTQHNLEAIHKHAKGGNCYL 141
Fly 142 SFERIELRNLRQCRQLENFLRLVGHEVKHLQVRHAPVFRNLD----GKLPNLKVLTI----ATTM 198
Fly 199 SMDDQHLAAMDDLDMKQFSHLVGFECDGVSLDAVLKMRMLLQLRRTENKVQLRHLQFEFRRNNEN 263
Fly 264 ALLDVLQDHAETLVCVNLFFSCSPGIDTREWCRAF-ENMH-------------NLRTLKLSGNCH 314
Fly 315 LVLLEAVLRAVPESAPIRQLDLTGMLSLTNELLLYVAGKWQSTLKVLDLMFCVQLNA-NCIDALR 378
Fly 379 QLSGRLEALTMAYCRELTGTGLLQGLAGDINYSLQELHLEETIFLDESSMCQLLERLPNLRRLSL 443
Fly 444 D----------------------------NCRQAVTDRTMATICQYQTRLRNLNIEYCMKITDQG 480
Fly 481 LMGYGDTPYPISRLRGLKELNLRGCRNVTDSSLMVGLKLPELRALSL-GYCNRLTSEGFEALTQN 544
Fly 545 CPSLE 549 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG12402 | NP_001303481.1 | F-box | 75..117 | CDD:279040 | 6/39 (15%) |
leucine-rich repeat | 281..303 | CDD:275381 | 6/35 (17%) | ||
LRR_RI | <297..482 | CDD:238064 | 47/227 (21%) | ||
leucine-rich repeat | 304..330 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 331..357 | CDD:275381 | 4/25 (16%) | ||
leucine-rich repeat | 358..379 | CDD:275381 | 6/21 (29%) | ||
leucine-rich repeat | 384..409 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 412..437 | CDD:275381 | 5/24 (21%) | ||
AMN1 | 430..595 | CDD:187754 | 40/149 (27%) | ||
leucine-rich repeat | 438..464 | CDD:275381 | 9/53 (17%) | ||
leucine-rich repeat | 465..496 | CDD:275381 | 5/30 (17%) | ||
leucine-rich repeat | 497..521 | CDD:275381 | 11/23 (48%) | ||
leucine-rich repeat | 522..547 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 548..573 | CDD:275381 | 2/2 (100%) | ||
leucine-rich repeat | 574..599 | CDD:275381 | |||
T01E8.1 | NP_001364580.1 | leucine-rich repeat | 190..217 | CDD:275381 | 8/37 (22%) |
leucine-rich repeat | 328..352 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 353..382 | CDD:275381 | 4/28 (14%) | ||
leucine-rich repeat | 383..407 | CDD:275381 | 5/23 (22%) | ||
leucine-rich repeat | 408..433 | CDD:275381 | 5/30 (17%) | ||
AMN1 | <430..>512 | CDD:187754 | 22/58 (38%) | ||
leucine-rich repeat | 434..452 | CDD:275381 | 9/17 (53%) | ||
leucine-rich repeat | 459..483 | CDD:275381 | 7/25 (28%) | ||
leucine-rich repeat | 484..510 | CDD:275381 | 2/2 (100%) | ||
leucine-rich repeat | 61..86 | CDD:275381 | 5/17 (29%) | ||
AMN1 | <69..203 | CDD:187754 | 31/200 (16%) | ||
leucine-rich repeat | 87..112 | CDD:275381 | 2/24 (8%) | ||
leucine-rich repeat | 113..136 | CDD:275381 | 9/55 (16%) | ||
leucine-rich repeat | 137..162 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 163..189 | CDD:275381 | 6/51 (12%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |