DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12402 and T01E8.1

DIOPT Version :9

Sequence 1:NP_001303481.1 Gene:CG12402 / 41714 FlyBaseID:FBgn0038202 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_001364580.1 Gene:T01E8.1 / 174584 WormBaseID:WBGene00011331 Length:516 Species:Caenorhabditis elegans


Alignment Length:525 Identity:109/525 - (20%)
Similarity:183/525 - (34%) Gaps:160/525 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LPNEMWLEIMSYLSYNDLLQLRMVSWRCRDLVH-RRRFMEKGKVIVTQHNLEAIHKHAKGGNCYL 141
            |..|:..|:::.|:.|:....::....|.::.: ..:.:..|::::.|..|.|:|:...      
 Worm    68 LSAELTDEMLNQLTTNNKYVEKITLVDCPNVTNLGAQAVTTGQILLRQLELRAMHQLTD------ 126

  Fly   142 SFERIELRNLRQCRQLENFLRLVGHEVKHLQVRHAPVFRNLD----GKLPNLKVLTI----ATTM 198
                       ||  |||.              ::|...::|    ||:.:..:.|:    .|..
 Worm   127 -----------QC--LENV--------------YSPFLYSVDLSGCGKITSQGIRTLLIKNPTIG 164

  Fly   199 SMDDQHLAAMDDLDMKQFSHLVGFECDGVSLDAVLKMRMLLQLRRTENKVQLRHLQFEFRRNNEN 263
            .:...|..::||..:...:|.||                          .:|..|:.:|..:   
 Worm   165 CLYLNHCRSLDDQVLYDIAHYVG--------------------------DRLHVLELDFPTS--- 200

  Fly   264 ALLDVLQDHAETLVCVNLFFSCSPGIDTREWCRAF-ENMH-------------NLRTLKLSGNCH 314
                 |.|.|..|   :...|..|.:......|.| ||:.             ||:||.|.||  
 Worm   201 -----LADPAAAL---HYLSSQCPNLSQLSLARFFHENLEDVENNVQFVIDGGNLKTLDLYGN-- 255

  Fly   315 LVLLEAVLRAVPESAPIRQLDLTGMLSLTNELLLYVAGKWQSTLKVLDLMFCVQLNA-NCIDALR 378
                  ....:|:..|..|           .:.|.|:|...|...:..||....||: |.|.::|
 Worm   256 ------YFSLMPQLPPTVQ-----------SIRLSVSGDEDSQQLLSTLMDQPFLNSINLIVSVR 303

  Fly   379 QLSGRLEALTMAYCRELTGTGLLQGLAGDINYSLQELHLEETIFLDESSMCQLLERLPNLRRLSL 443
            :  ..::|:..|       ..||..:...:.:.:.:|.:......|| .:..:.|.||||..|||
 Worm   304 E--ANIQAVDNA-------NHLLCAIIPLLGHKITKLQISVPRLFDE-PLKLVTEYLPNLTHLSL 358

  Fly   444 D----------------------------NCRQAVTDRTMATICQYQTRLRNLNIEYCMKITDQG 480
            :                            .||..:|.|.:..|.:....|.:|...:...:.|:.
 Worm   359 EINHLNTNILQKYFAGGSKSNASKLKCLKICRMRMTYRVLFAIARGARNLTDLETSHMSSVDDRF 423

  Fly   481 LMGYGDTPYPISRLRGLKELNLRGCRNVTDSSLMVGLKLPELRALSL-GYCNRLTSEGFEALTQN 544
            |...|      ...|.|:.||:.|||.|:|..|.|..|...||.:.: |  ...|.:....|.|.
 Worm   424 LCLLG------GNCRQLRCLNINGCRMVSDKGLAVLAKRCPLREVRIRG--TACTDKSIYTLAQF 480

  Fly   545 CPSLE 549
            ||.||
 Worm   481 CPELE 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12402NP_001303481.1 F-box 75..117 CDD:279040 6/39 (15%)
leucine-rich repeat 281..303 CDD:275381 6/35 (17%)
LRR_RI <297..482 CDD:238064 47/227 (21%)
leucine-rich repeat 304..330 CDD:275381 7/25 (28%)
leucine-rich repeat 331..357 CDD:275381 4/25 (16%)
leucine-rich repeat 358..379 CDD:275381 6/21 (29%)
leucine-rich repeat 384..409 CDD:275381 4/24 (17%)
leucine-rich repeat 412..437 CDD:275381 5/24 (21%)
AMN1 430..595 CDD:187754 40/149 (27%)
leucine-rich repeat 438..464 CDD:275381 9/53 (17%)
leucine-rich repeat 465..496 CDD:275381 5/30 (17%)
leucine-rich repeat 497..521 CDD:275381 11/23 (48%)
leucine-rich repeat 522..547 CDD:275381 7/25 (28%)
leucine-rich repeat 548..573 CDD:275381 2/2 (100%)
leucine-rich repeat 574..599 CDD:275381
T01E8.1NP_001364580.1 leucine-rich repeat 190..217 CDD:275381 8/37 (22%)
leucine-rich repeat 328..352 CDD:275381 5/24 (21%)
leucine-rich repeat 353..382 CDD:275381 4/28 (14%)
leucine-rich repeat 383..407 CDD:275381 5/23 (22%)
leucine-rich repeat 408..433 CDD:275381 5/30 (17%)
AMN1 <430..>512 CDD:187754 22/58 (38%)
leucine-rich repeat 434..452 CDD:275381 9/17 (53%)
leucine-rich repeat 459..483 CDD:275381 7/25 (28%)
leucine-rich repeat 484..510 CDD:275381 2/2 (100%)
leucine-rich repeat 61..86 CDD:275381 5/17 (29%)
AMN1 <69..203 CDD:187754 31/200 (16%)
leucine-rich repeat 87..112 CDD:275381 2/24 (8%)
leucine-rich repeat 113..136 CDD:275381 9/55 (16%)
leucine-rich repeat 137..162 CDD:275381 4/24 (17%)
leucine-rich repeat 163..189 CDD:275381 6/51 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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