DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12402 and fbxl13

DIOPT Version :9

Sequence 1:NP_001303481.1 Gene:CG12402 / 41714 FlyBaseID:FBgn0038202 Length:671 Species:Drosophila melanogaster
Sequence 2:XP_017209779.1 Gene:fbxl13 / 101883454 ZFINID:ZDB-GENE-140106-120 Length:796 Species:Danio rerio


Alignment Length:699 Identity:150/699 - (21%)
Similarity:247/699 - (35%) Gaps:210/699 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EKLDSDKDK-------EGSSKAAIELLPNEMWLEIMSYLSYNDLLQLRMV--------------- 101
            :||:.|..:       :|..:..:.||||.::|:|...|...|||:...|               
Zfish   200 KKLERDMKESQNSGIPQGDGQDNLSLLPNRLFLKIFQSLGVRDLLKCAQVCQSWKAITQISSLWT 264

  Fly   102 --------SWRCRDLVHRRRFMEKGKVIVTQHNLEAIHKHAKGGNCY--LSFERIELRNLRQCRQ 156
                    ||....:|.|         |:..|.:..|..:..|.|..  |||.||.  ......|
Zfish   265 EIDFSPESSWITDQMVER---------ILRLHRVYVISVNLCGCNMVQRLSFRRIS--TFTFIYQ 318

  Fly   157 LENFLRLVGHEVKHLQVRHAPVFRNLDGKLPNLKVLTIATTMSMDDQHLAAMDDLDMKQFSHLVG 221
            ...|:...   |..:::::..||:   |:..||:.|.::...:::|:::..:  |:..|....:.
Zfish   319 TTAFIFCF---VNLIKIQNTFVFK---GQCRNLQELDLSECPTVNDENMKMI--LEGCQSLLSLN 375

  Fly   222 FECDGVSLDAVLKMRMLLQLRRTENKVQLRHLQFEFRRNNENALLDVLQDHAETLVCVNLFFSCS 286
            ..|..:: :|.:|   :|..|..   |.||.|...:                    |::......
Zfish   376 LACTHIA-NATIK---VLASRCC---VMLRSLNLAY--------------------CIHFSDKGL 413

  Fly   287 PGIDTREWCRAFENMHNLRTLKLSGNCHLVLLEAVLRAVPESAPIRQLDLTGMLSLTNELLLYVA 351
            ..:.|...||      .||.|.||| |..:.::...........::|:.|..:.:||:       
Zfish   414 QYLTTGTGCR------RLRHLNLSG-CSQITVDGFTSVAETCNSLQQIVLNDLPTLTD------- 464

  Fly   352 GKWQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAYCRELTGTGLLQGL-AGDINY----- 410
                         .|||                  :.::.||.||...||:.| ..|:.:     
Zfish   465 -------------ICVQ------------------VLVSRCRMLTVISLLESLNLSDVAFKAVAE 498

  Fly   411 --SLQELHLEETIFLDESSMCQLLERLPNLRRLSLDNCRQAVTDRTMATICQYQTRLRNLNIEYC 473
              .|.::.:|....:.:||:..|......|..|.| :|...|||....|:... |:|.||||..|
Zfish   499 VIDLTKILIEGNDVITDSSVKALCRSCLKLSELHL-SCCPRVTDACFKTLGNL-TKLCNLNISGC 561

  Fly   474 MKITDQGLMGYGDTPYPISRLRGLKELNLRGCRNVTDSSL-MVGLKLPELRALSLGYCNRLTSEG 537
            .|:||.||....:.|    ....|:||:|..|..:||.|| .:..|...|..|:|.:|..||..|
Zfish   562 FKVTDMGLHYITEGP----SAGQLRELDLSYCLKITDLSLRRISQKCISLTNLALCFCENLTDNG 622

  Fly   538 FE------------------------ALTQN-------------------------CPSLEALCV 553
            ||                        ||..|                         |..||.|.|
Zfish   623 FECLDKCSSLISLDISGCKIHDKGLSALGANPSLRKLSAAECVFITDIGIKMFCRLCQRLELLDV 687

  Fly   554 SSCMAVDDETVLNIVSNLKRLRVLNLSNCTKLTLQSIHHILAHGHNLVQL--------------- 603
            ..|:.:.|..:..:....:.:..:.::.|.|:|..::.::...||.|.:|               
Zfish   688 CQCVRLSDRAIKALSFFCRTIATVRIAGCPKMTDAAVKYLTRAGHFLRELDVSGCSLLTDHTVCF 752

  Fly   604 IACSIDGMDHEQAQRILESQRPQMKQVLLXQERYIHXRSRNTPHHNDWG 652
            :.||   ..|.::..:|..:....:..|..|.|..|.:     |.||.|
Zfish   753 LQCS---CLHLRSINMLYCRNISRQAALKLQHRVQHWK-----HSNDDG 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12402NP_001303481.1 F-box 75..117 CDD:279040 15/64 (23%)
leucine-rich repeat 281..303 CDD:275381 3/21 (14%)
LRR_RI <297..482 CDD:238064 46/192 (24%)
leucine-rich repeat 304..330 CDD:275381 7/25 (28%)
leucine-rich repeat 331..357 CDD:275381 4/25 (16%)
leucine-rich repeat 358..379 CDD:275381 3/20 (15%)
leucine-rich repeat 384..409 CDD:275381 8/25 (32%)
leucine-rich repeat 412..437 CDD:275381 5/24 (21%)
AMN1 430..595 CDD:187754 54/214 (25%)
leucine-rich repeat 438..464 CDD:275381 8/25 (32%)
leucine-rich repeat 465..496 CDD:275381 12/30 (40%)
leucine-rich repeat 497..521 CDD:275381 10/24 (42%)
leucine-rich repeat 522..547 CDD:275381 13/73 (18%)
leucine-rich repeat 548..573 CDD:275381 6/24 (25%)
leucine-rich repeat 574..599 CDD:275381 4/24 (17%)
fbxl13XP_017209779.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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