DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and gpr39

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_956711.1 Gene:gpr39 / 791773 ZFINID:ZDB-GENE-040426-1395 Length:440 Species:Danio rerio


Alignment Length:456 Identity:126/456 - (27%)
Similarity:195/456 - (42%) Gaps:102/456 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PPRD------PLAIVIPVTVVYSLIFITGVVGNIST---CIVIKKNRSMHTATNYYLFSLAISDF 67
            |.||      ...:.:.:||:|.||...||:||.:|   ..|:::|..:..:...::.|||.||.
Zfish     6 PERDWQQLEPSYGLKVFLTVLYCLILSLGVLGNSATIHVAQVLQRNGYLQRSVAEHMVSLACSDL 70

  Fly    68 LLLLSGVPQEV-SYIWSKYPYV--FGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLG 129
            |:||.|:|.|: |.||  :|::  .|:..|.....|.|..:.||:|.:...::|||:||||||..
Zfish    71 LVLLIGLPVELYSAIW--FPFLSRSGDAACRIYNFLFELCSYATILNVATLSLERYLAICHPFRY 133

  Fly   130 QAMSKLSRAIRIIVLVWIMAIVTAIPQAAQFGIEHY------SGVEQCGIVRVIVKHSFQLSTFI 188
            :|: :..|..|:::..|:.:.:.|:|.....|.|.|      :.|:.......:.:|.....|.|
Zfish   134 RAL-RGGRTRRLLLAAWLCSALVALPLLVATGTEGYVPAGRQTPVQNLTFCTSLSQHWVMYRTSI 197

  Fly   189 FFLAPMSIILVLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSFNGGGSG 253
            |      ...|||||:         :.|.|.:.|..         ||......|.|         
Zfish   198 F------TAFVLYLLV---------LAGVAFMCRAM---------ILVLRAPMGPA--------- 229

  Fly   254 AGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYAPA---RGA 315
              .||..|....|  |.||:.:.   ::.:..||.:|...|:||.|...:||:....|.   .|:
Zfish   230 --EAGASGDHKHQ--SARGKASR---KQTILFLVLIVCALFVCWMPNQIRRLMTAAVPKSSWTGS 287

  Fly   316 KLRDQHEFVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAF--------------KAVLFGKK 366
            .|..     |..:..|:...:|||:.:||:|||:.|.:||.||              :..|....
Zfish   288 YLTS-----YIKLHPVADSFFYLSSVLNPMLYNLSSRQFRSAFLQTLLCRLSLQHANRRTLENSG 347

  Fly   367 VSKGSLN--------SRNNIESRRLRRALTNSSQTQRFSIESAEQPK--------PSIMQNPTNK 415
            .||.|.|        |.|.|......|:...||..:|.|:.:.::|:        |   ||.||.
Zfish   348 ASKSSNNTLRPLLQRSLNRIRMATSSRSTPPSSAERRDSLNTTDRPQGEGKLTLDP---QNTTNW 409

  Fly   416 P 416
            |
Zfish   410 P 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 101/351 (29%)
TM helix 1 21..48 CDD:320262 11/29 (38%)
TM helix 2 55..81 CDD:320262 12/26 (46%)
TM helix 3 94..124 CDD:320262 10/29 (34%)
TM helix 4 136..158 CDD:320262 5/21 (24%)
TM helix 5 178..207 CDD:320262 9/28 (32%)
TM helix 6 277..307 CDD:320262 9/29 (31%)
TM helix 7 326..351 CDD:320262 9/24 (38%)
gpr39NP_956711.1 7tm_1 37..314 CDD:278431 88/324 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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