DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and Nmur1

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_017452122.1 Gene:Nmur1 / 65276 RGDID:619867 Length:414 Species:Rattus norvegicus


Alignment Length:435 Identity:136/435 - (31%)
Similarity:202/435 - (46%) Gaps:73/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NMSHD------LGPPRDPLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLA 63
            |::|:      |||.:  :...:|:.|.|.|||:.|.:||..||.||.:.::|||.||:||||||
  Rat    30 NLTHEDLRLKYLGPQQ--VKQFLPICVTYLLIFVVGTLGNGLTCTVILRQKAMHTPTNFYLFSLA 92

  Fly    64 ISDFLLLLSGVPQEVSYIWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFL 128
            :||.|:||.|:|.|:..:...||:..|...|..|.||.||...|:||.:||.:||||:|:.||..
  Rat    93 VSDLLVLLVGLPLELYEMQHNYPFQLGAGGCYFRILLLETVCLASVLNVTALSVERYVAVVHPLQ 157

  Fly   129 GQAMSKLSRAIRIIVLVWIMAIVTAIPQAAQFGIE--------HYSGVEQCGIVR--VIVKHSFQ 183
            .:::...:...|::..:|:.||:.::|..:..|:.        .......|.:||  ...|...|
  Rat   158 AKSVMTRTHVRRMLGAIWVFAILFSLPNTSLHGLSPLYVPCRGPVPDSVTCTLVRPQFFYKLVIQ 222

  Fly   184 LSTFIFFLAPMSIILVLYLLIGVHLYRSTL-----VEGPASVARRQQLKSVPSDTILYRYGGSGT 243
            .:..:||..||..|.|||||||:.|.|..:     |:|..|.|.||                   
  Rat   223 TTILLFFCLPMVTISVLYLLIGLRLRRERILLQEEVKGRISAAARQ------------------- 268

  Fly   244 AMSFNGGGSGAGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAI 308
                                 |...|:  :|.....|:|.:||:|:|:.|..||.||||.||:. 
  Rat   269 ---------------------ASHRSI--QLRDRERRQVTKMLIALVIVFGTCWVPFHADRLMW- 309

  Fly   309 YAPARGAKLRDQHEFVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVL-FGKKVSKGSL 372
               :..:...|.....:..:...|||..||.:..||:|||:||.:|||:|:..| .|.:......
  Rat   310 ---SMVSHWTDGLRLAFQSVHLASGVFLYLGSAANPVLYNLMSTRFRESFRETLGLGTRCCHRHQ 371

  Fly   373 NSRNNIESRRLRRALTNSSQTQRFSIESAEQPKPSIMQNPTNKPP 417
            ...::....||....|...:..| .:..||...|...|.  ..||
  Rat   372 PRHDSHSHLRLTTVSTLCDRNSR-DVPLAENRDPGCEQE--TDPP 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 118/351 (34%)
TM helix 1 21..48 CDD:320262 13/26 (50%)
TM helix 2 55..81 CDD:320262 16/25 (64%)
TM helix 3 94..124 CDD:320262 16/29 (55%)
TM helix 4 136..158 CDD:320262 5/21 (24%)
TM helix 5 178..207 CDD:320262 14/28 (50%)
TM helix 6 277..307 CDD:320262 15/29 (52%)
TM helix 7 326..351 CDD:320262 10/24 (42%)
Nmur1XP_017452122.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338877
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BGH7
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 1 1.000 - - FOG0001494
OrthoInspector 1 1.000 - - mtm8974
orthoMCL 1 0.900 - - OOG6_105236
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X673
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.710

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