DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and CCHa1-R

DIOPT Version :10

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_611241.2 Gene:CCHa1-R / 37004 FlyBaseID:FBgn0050106 Length:499 Species:Drosophila melanogaster


Alignment Length:459 Identity:108/459 - (23%)
Similarity:183/459 - (39%) Gaps:118/459 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RDPLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVP-QE 77
            |.|...::|  ::::|||:.||:||.:..:|....|.|....|.|:.|||::|.|::::.|| ..
  Fly    77 RRPETYIVP--ILFALIFVVGVLGNGTLIVVFLSVRQMRNVPNTYILSLALADLLVIITTVPLAS 139

  Fly    78 VSYIWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFL-------GQAMSKL 135
            ..|....:||  |.::|.....:.:.|...:|.|:||.:.:||.||..|..       |:..:::
  Fly   140 TVYTVEYWPY--GSFLCSLSEFMKDVSIGVSVFTLTALSGDRYFAIVDPLRKFHAHGGGRRATRM 202

  Fly   136 SRAIRIIVLVWIMAIVTAIPQAAQFGIEH-----------YSGVEQCGIVRVIVKHSFQLSTFIF 189
            :.|  ..|.:|::||:..:|......::|           |...|:.||  ...|....|...::
  Fly   203 TLA--TAVSIWLLAILCGLPALIGSNLKHLGINEKSIVICYPYPEEWGI--NYAKSMVLLHFLVY 263

  Fly   190 FLAPMSIILVLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSFNGGGSGA 254
            :..|:.:|.|.|:||.:||..|..|.|....|.||                              
  Fly   264 YAIPLVVIAVFYVLIALHLMYSASVPGEIQGAVRQ------------------------------ 298

  Fly   255 GTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYAPARGAKLRD 319
                           ||.|      |:|...::|.||.|.:|:.|:|...|...:.|.    .:|
  Fly   299 ---------------VRAR------RKVAVTVLAFVVIFGICFLPYHVFFLWFYFWPT----AQD 338

  Fly   320 QHEFVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLF-----GKKVSKG--------- 370
            .:...:.|:..|:..:.:.::|.||:....:|..||:.|...||     |::..:|         
  Fly   339 DYNAFWHVLRIVAYCMSFANSCANPVALYFVSGAFRKHFNRYLFCRGASGRRKKRGQHDTFCMHR 403

  Fly   371 --SLNS-------------RNNIESRRLRR----ALTNSSQTQRFSIESAEQPKPSIM---QNPT 413
              ||.|             ::.|.|.||:.    .|.|.......:|.:.|...|.:.   .|..
  Fly   404 DTSLTSTASKRFQSRHSCYQSTIRSCRLQETTITTLPNGGNQNGANISAVELALPVLQAPGHNEA 468

  Fly   414 NKPP 417
            :.||
  Fly   469 HAPP 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 86/355 (24%)
TM helix 1 21..48 CDD:320262 9/26 (35%)
TM helix 2 55..81 CDD:320262 9/26 (35%)
TM helix 3 94..124 CDD:320262 9/29 (31%)
TM helix 4 136..158 CDD:320262 6/21 (29%)
TM helix 5 178..207 CDD:320262 8/28 (29%)
TM helix 6 277..307 CDD:320262 10/29 (34%)
TM helix 7 326..351 CDD:320262 5/24 (21%)
CCHa1-RNP_611241.2 7tmA_Bombesin_R-like 82..377 CDD:320593 86/357 (24%)
TM helix 1 83..109 CDD:320593 9/27 (33%)
TM helix 2 116..142 CDD:320593 9/25 (36%)
TM helix 3 154..184 CDD:320593 9/29 (31%)
TM helix 4 201..221 CDD:320593 5/21 (24%)
TM helix 5 252..277 CDD:320593 6/24 (25%)
TM helix 6 300..330 CDD:320593 12/35 (34%)
TM helix 7 345..370 CDD:320593 5/24 (21%)

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