DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and Gpr39

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001107864.1 Gene:Gpr39 / 288995 RGDID:1306745 Length:456 Species:Rattus norvegicus


Alignment Length:477 Identity:119/477 - (24%)
Similarity:186/477 - (38%) Gaps:135/477 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IVIPVTVVYSLIFITGVVGN---ISTCIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVPQE-VS 79
            |.|.:|:||.::|:.|::||   |....|::|...:......::.|||.||.|:.|.|:|.| .|
  Rat    29 IKITLTLVYLIVFVVGILGNSVTIRVTQVLQKKGYLQKEVTDHMISLACSDILVFLIGMPMEFYS 93

  Fly    80 YIWSKYPYVFGEYI--CIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSRAIRII 142
            .||:  |.....|.  |.....|.||.:.||:|.:...:.||||||||||..:.:|...:...:|
  Rat    94 IIWN--PLTTPSYALSCKLHTFLFETCSYATLLHVLTLSFERYIAICHPFRYKDVSGPCQVKLLI 156

  Fly   143 VLVWIMAIVTAIPQAAQFGIEH-------YSGVEQCGIVRVIVKHS------------------- 181
            ..||:.:.:.|:|.....|||:       :.|: .|.:.|  .:|.                   
  Rat   157 GFVWVTSALVALPLLFAMGIEYPLANVPTHKGL-NCNLSR--TRHHDHPGDSNMSICTNLSSRWE 218

  Fly   182 -FQLSTFIFFLAPMSIILVLYLLIGVHLYRSTLVEGPASVA------RRQQLKSVPSDTILYRYG 239
             ||.|.|..|        .:||::.|            |||      .:..:||           
  Rat   219 VFQSSIFGAF--------AVYLVVLV------------SVAFMCWNMMKVLMKS----------- 252

  Fly   240 GSGTAMSFNGGGSGAGTAGLMGGSGAQLSSVRGRLNHYGT--RRVLRMLVAVVVCFFLCWAPFHA 302
                            ..|.:.|:|.||...:.......|  |:.:..|..:||...:||.|...
  Rat   253 ----------------KRGTLAGTGPQLQLRKSESEESRTARRQTIIFLRLIVVTLAVCWMPNQI 301

  Fly   303 QRLIAIYAPARGAKLRDQHEF------VYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAF--- 358
            :|::|...|        :|::      .|.::...|...:|||:.:||||||:.|.:||:.|   
  Rat   302 RRIMAAAKP--------KHDWTKSYFKAYMILLPFSDTFFYLSSVVNPLLYNVSSQQFRKVFWQV 358

  Fly   359 ----------------KAVLFGKKVSKGSLNS--------RNNIESRRLRRALTNSSQTQRFSIE 399
                            :|.....|.|..|..|        |:|..|||..:...::.|.:...:|
  Rat   359 LCCRLTLQHANQEKQQRAYFSSTKNSSRSARSPLIFLASRRSNSSSRRTNKVFLSTFQAEAKPLE 423

  Fly   400 SAEQP-KPSIMQNPTNKPPVAA 420
            ...|| .|...|..:...|..:
  Rat   424 GEHQPLSPESPQTGSETKPAGS 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 100/383 (26%)
TM helix 1 21..48 CDD:320262 10/29 (34%)
TM helix 2 55..81 CDD:320262 11/26 (42%)
TM helix 3 94..124 CDD:320262 12/29 (41%)
TM helix 4 136..158 CDD:320262 5/21 (24%)
TM helix 5 178..207 CDD:320262 8/48 (17%)
TM helix 6 277..307 CDD:320262 9/31 (29%)
TM helix 7 326..351 CDD:320262 10/24 (42%)
Gpr39NP_001107864.1 7tm_1 47..344 CDD:278431 88/356 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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