DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and GPR39

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001499.1 Gene:GPR39 / 2863 HGNCID:4496 Length:453 Species:Homo sapiens


Alignment Length:417 Identity:109/417 - (26%)
Similarity:172/417 - (41%) Gaps:97/417 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IVIPVTVVYSLIFITGVVGNIST---CIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVPQE-VS 79
            |.|.:.:||.:||:.|::||.:|   ..|::|...:......::.|||.||.|:.|.|:|.| .|
Human    29 IKITLILVYLIIFVMGLLGNSATIRVTQVLQKKGYLQKEVTDHMVSLACSDILVFLIGMPMEFYS 93

  Fly    80 YIWSKYPYVFGEYI--CIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSRAIRII 142
            .||:  |.....|.  |.....|.|..:.||:|.:...:.||||||||||..:|:|...:...:|
Human    94 IIWN--PLTTSSYTLSCKLHTFLFEACSYATLLHVLTLSFERYIAICHPFRYKAVSGPCQVKLLI 156

  Fly   143 VLVWIMAIVTAIPQAAQFGIEH-------YSGVEQCGIVRVIVKHS------------------- 181
            ..||:.:.:.|:|.....|.|:       :.|: .|.  |...:|.                   
Human   157 GFVWVTSALVALPLLFAMGTEYPLVNVPSHRGL-TCN--RSSTRHHEQPETSNMSICTNLSSRWT 218

  Fly   182 -FQLSTFIFFLAPMSIILVLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAM 245
             ||.|.|..|:    :.||:.|.:....:....|     :.:.|:                    
Human   219 VFQSSIFGAFV----VYLVVLLSVAFMCWNMMQV-----LMKSQK-------------------- 254

  Fly   246 SFNGGGSGAGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYA 310
                 ||.||     |....||.......:....|:.:..|..:||...:||.|...:|::|...
Human   255 -----GSLAG-----GTRPPQLRKSESEESRTARRQTIIFLRLIVVTLAVCWMPNQIRRIMAAAK 309

  Fly   311 PARGAKLRDQHEF------VYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSK 369
            |        :|::      .|.::...|...:|||:.||||||.:.|.:||..|..||    ..:
Human   310 P--------KHDWTRSYFRAYMILLPFSETFFYLSSVINPLLYTVSSQQFRRVFVQVL----CCR 362

  Fly   370 GSLNSRNNIESRRLRRALTNSSQTQRF 396
            .||...|:  .:|||....:::.:.||
Human   363 LSLQHANH--EKRLRVHAHSTTDSARF 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 97/375 (26%)
TM helix 1 21..48 CDD:320262 10/29 (34%)
TM helix 2 55..81 CDD:320262 11/26 (42%)
TM helix 3 94..124 CDD:320262 11/29 (38%)
TM helix 4 136..158 CDD:320262 5/21 (24%)
TM helix 5 178..207 CDD:320262 9/48 (19%)
TM helix 6 277..307 CDD:320262 8/29 (28%)
TM helix 7 326..351 CDD:320262 10/24 (42%)
GPR39NP_001499.1 7tmA_GPR39 31..355 CDD:320263 97/375 (26%)
TM helix 1 31..58 CDD:320263 9/26 (35%)
TM helix 2 68..94 CDD:320263 10/25 (40%)
TM helix 3 108..138 CDD:320263 11/29 (38%)
TM helix 4 150..172 CDD:320263 5/21 (24%)
TM helix 5 217..246 CDD:320263 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..274 7/23 (30%)
TM helix 6 276..306 CDD:320263 8/29 (28%)
TM helix 7 323..348 CDD:320263 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..453
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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