DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PK1-R and GHSR

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_940799.1 Gene:GHSR / 2693 HGNCID:4267 Length:366 Species:Homo sapiens


Alignment Length:415 Identity:124/415 - (29%)
Similarity:188/415 - (45%) Gaps:89/415 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAGNMSHDLGPPRD----------PLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTAT 55
            ::..::..|..|..|          |..::..||.....:|:.|:.||:.|.:|:.:.|.:.|.|
Human    14 LTLADLDWDASPGNDSLGDELLQLFPAPLLAGVTATCVALFVVGIAGNLLTMLVVSRFRELRTTT 78

  Fly    56 NYYLFSLAISDFLLLLSGVPQEVSYIWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERY 120
            |.||.|:|.||.|:.|. :|.::..:|...|:.||:.:|.....::|:...||||||||.:||||
Human    79 NLYLSSMAFSDLLIFLC-MPLDLVRLWQYRPWNFGDLLCKLFQFVSESCTYATVLTITALSVERY 142

  Fly   121 IAICHPFLGQAMSKLSRAIRIIVLVWIMAIVTAIPQAAQFGIEHYSGVE-----QC--------- 171
            .|||.|...:.:....|...:|.::|.:|..:|.|.....|:||.:|.:     :|         
Human   143 FAICFPLRAKVVVTKGRVKLVIFVIWAVAFCSAGPIFVLVGVEHENGTDPWDTNECRPTEFAVRS 207

  Fly   172 GIVRVIVKHSFQLSTFIFFLAPMSIILVLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILY 236
            |::.|:|..|     .|||..|:..:.|||.|||..|:|           ||:      .|.:: 
Human   208 GLLTVMVWVS-----SIFFFLPVFCLTVLYSLIGRKLWR-----------RRR------GDAVV- 249

  Fly   237 RYGGSGTAMSFNGGGSGAGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFH 301
                                       ||.|..    .||   ::.::||..||..|.|||.|||
Human   250 ---------------------------GASLRD----QNH---KQTVKMLAVVVFAFILCWLPFH 280

  Fly   302 AQRLIAIYAPARGAKLRDQHEFVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKK 366
            ..|.:...:...|:....|   :......||.||:|||..|||:||||||.|:|.|...:|..:.
Human   281 VGRYLFSKSFEPGSLEIAQ---ISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAVFRLLGFEP 342

  Fly   367 VSKGSLNSRNNIESRRLRRALTNSS 391
            .|:..|::..:..|    ||.|.||
Human   343 FSQRKLSTLKDESS----RAWTESS 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 110/350 (31%)
TM helix 1 21..48 CDD:320262 8/26 (31%)
TM helix 2 55..81 CDD:320262 11/25 (44%)
TM helix 3 94..124 CDD:320262 15/29 (52%)
TM helix 4 136..158 CDD:320262 6/21 (29%)
TM helix 5 178..207 CDD:320262 12/28 (43%)
TM helix 6 277..307 CDD:320262 12/29 (41%)
TM helix 7 326..351 CDD:320262 14/24 (58%)
GHSRNP_940799.1 7tmA_GHSR 44..334 CDD:320259 110/350 (31%)
TM helix 1 44..71 CDD:320259 8/26 (31%)
TM helix 2 78..103 CDD:320259 11/25 (44%)
TM helix 3 116..146 CDD:320259 15/29 (52%)
TM helix 4 158..180 CDD:320259 6/21 (29%)
TM helix 5 209..238 CDD:320259 13/33 (39%)
TM helix 6 256..286 CDD:320259 14/32 (44%)
TM helix 7 302..327 CDD:320259 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
44.050

Return to query results.
Submit another query.