DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and Cckbr

DIOPT Version :10

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_037297.2 Gene:Cckbr / 25706 RGDID:2290 Length:452 Species:Rattus norvegicus


Alignment Length:421 Identity:117/421 - (27%)
Similarity:177/421 - (42%) Gaps:113/421 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAGNMSHDLGPPR------DPLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLF 60
            ||||:|.:  |||      ..|.:.|.:| :|::||:..|.||:...:|:..:|.:.|.||.:|.
  Rat    33 SAGNLSCE--PPRIRGTGTRELEMAIRIT-LYAVIFLMSVGGNVLIIVVLGLSRRLRTVTNAFLL 94

  Fly    61 SLAISDFLLLLSGVPQEVSYIWSKYP-----YVFGEYICIGRGLLAETSANATVLTITAFTVERY 120
            |||:||.||.::.:|      ::..|     ::||..||.....|...|.:.:.|.:.|..:|||
  Rat    95 SLAVSDLLLAVACMP------FTLLPNLMGTFIFGTVICKAISYLMGVSVSVSTLNLVAIALERY 153

  Fly   121 IAICHPFLGQAMSKLSRAIRIIVLVWIMAIVTAIPQAAQFGIEHYSGVEQCG-----------IV 174
            .|||.|...:.....|.|.|:|:..|:::.:..:|...      |:.|:..|           ..
  Rat   154 SAICRPLQARVWQTRSHAARVILATWLLSGLLMVPYPV------YTMVQPVGPRVLQCMHRWPSA 212

  Fly   175 RVIVKHSFQLSTFIFFLAPMSIILVLYLLIGVHLYRSTLVEG-----PASVARRQQLKSVPSDTI 234
            ||....|..|...:||: |..:|.|.|.||...||.....:|     ..|.||.|  ..:|    
  Rat   213 RVQQTWSVLLLLLLFFI-PGVVIAVAYGLISRELYLGLHFDGENDSETQSRARNQ--GGLP---- 270

  Fly   235 LYRYGGSGTAMSFNGGG-----SGAGTAGLMGGSGAQLSSVRGRLNH------------------ 276
                ||:........||     |.||.    ...|..:...|.||..                  
  Rat   271 ----GGAAPGPVHQNGGCRPVTSVAGE----DSDGCCVQLPRSRLEMTTLTTPTPGPVPGPRPNQ 327

  Fly   277 ---YGTRRVLRMLVAVVVCFFLCWAPFH------------AQRLIAIYAPARGAKLRDQHEFVYT 326
               ...:||:|||:.:|:.|||||.|.:            |||.::      ||.:    .|:: 
  Rat   328 AKLLAKKRVVRMLLVIVLLFFLCWLPVYSVNTWRAFDGPGAQRALS------GAPI----SFIH- 381

  Fly   327 VMTYVSGVLYYLSTCINPLLYNIMSHKFREA 357
                   :|.|:|.|:|||:|..|..:||:|
  Rat   382 -------LLSYVSACVNPLVYCFMHRRFRQA 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 108/396 (27%)
TM helix 1 21..48 CDD:320262 9/26 (35%)
TM helix 2 55..81 CDD:320262 11/25 (44%)
TM helix 3 94..124 CDD:320262 9/29 (31%)
TM helix 4 136..158 CDD:320262 6/21 (29%)
TM helix 5 178..207 CDD:320262 10/28 (36%)
TM helix 6 277..307 CDD:320262 15/41 (37%)
TM helix 7 326..351 CDD:320262 8/24 (33%)
CckbrNP_037297.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
7tm_GPCRs 55..406 CDD:475119 108/397 (27%)
TM helix 1 57..81 CDD:410628 8/24 (33%)
TM helix 2 90..112 CDD:410628 10/27 (37%)
TM helix 3 128..150 CDD:410628 4/21 (19%)
TM helix 4 173..189 CDD:410628 3/15 (20%)
TM helix 5 216..239 CDD:410628 7/23 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..286 9/38 (24%)
TM helix 6 337..359 CDD:410628 10/21 (48%)
TM helix 7 374..399 CDD:410628 11/36 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..452
Blue background indicates that the domain is not in the aligned region.

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