DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and Ghsr

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_017175002.1 Gene:Ghsr / 208188 MGIID:2441906 Length:427 Species:Mus musculus


Alignment Length:406 Identity:127/406 - (31%)
Similarity:190/406 - (46%) Gaps:83/406 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAGN--MSHDLGPPRDPLAIVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAI 64
            |.||  :|.:| .|..|..::..||.....:|:.|:.||:.|.:|:.:.|.:.|.||.||.|:|.
Mouse    86 SPGNDSLSDEL-LPLFPAPLLAGVTATCVALFVVGISGNLLTMLVVSRFRELRTTTNLYLSSMAF 149

  Fly    65 SDFLLLLSGVPQEVSYIWSKYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLG 129
            ||.|:.|. :|.::..:|...|:.||:.:|.....::|:...||||||||.:||||.|||.|...
Mouse   150 SDLLIFLC-MPLDLVRLWQYRPWNFGDLLCKLFQFVSESCTYATVLTITALSVERYFAICFPLRA 213

  Fly   130 QAMSKLSRAIRIIVLVWIMAIVTAIPQAAQFGIEHYSGVE-----QC---------GIVRVIVKH 180
            :.:....|...:|:::|.:|..:|.|.....|:||.:|.:     :|         |::.|:|..
Mouse   214 KVVVTKGRVKLVILVIWAVAFCSAGPIFVLVGVEHENGTDPRDTNECRATEFAVRSGLLTVMVWV 278

  Fly   181 SFQLSTFIFFLAPMSIILVLYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAM 245
            |     .:||..|:..:.|||.|||..|:|           ||                      
Mouse   279 S-----SVFFFLPVFCLTVLYSLIGRKLWR-----------RR---------------------- 305

  Fly   246 SFNGGGSGAGTAGLMGGSGAQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYA 310
                            |..|..||:|.: ||   ::.::||..||..|.|||.|||..|.:...:
Mouse   306 ----------------GDAAVGSSLRDQ-NH---KQTVKMLAVVVFAFILCWLPFHVGRYLFSKS 350

  Fly   311 PARGAKLRDQHEFVYTVMTYVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSKGSLNSR 375
            ...|:....|   :......||.||:|||..|||:||||||.|:|.|...:|..:..|:..|::.
Mouse   351 FEPGSLEIAQ---ISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAVFKLLGFESFSQRKLSTL 412

  Fly   376 NNIESRRLRRALTNSS 391
            .:..|    ||.|.||
Mouse   413 KDESS----RAWTKSS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 110/350 (31%)
TM helix 1 21..48 CDD:320262 8/26 (31%)
TM helix 2 55..81 CDD:320262 11/25 (44%)
TM helix 3 94..124 CDD:320262 15/29 (52%)
TM helix 4 136..158 CDD:320262 6/21 (29%)
TM helix 5 178..207 CDD:320262 11/28 (39%)
TM helix 6 277..307 CDD:320262 12/29 (41%)
TM helix 7 326..351 CDD:320262 14/24 (58%)
GhsrXP_017175002.1 7tmA_GHSR 107..395 CDD:320259 110/349 (32%)
TM helix 1 108..132 CDD:320259 8/23 (35%)
TM helix 2 141..162 CDD:320259 10/21 (48%)
TM helix 3 179..201 CDD:320259 9/21 (43%)
TM helix 4 224..240 CDD:320259 4/15 (27%)
TM helix 5 272..295 CDD:320259 8/27 (30%)
TM helix 6 320..345 CDD:320259 11/24 (46%)
TM helix 7 363..388 CDD:320259 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.050

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