DRSC/TRiP Functional Genomics Resources

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Protein Alignment PK1-R and LOC108648264

DIOPT Version :9

Sequence 1:NP_001014620.1 Gene:PK1-R / 41713 FlyBaseID:FBgn0038201 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_017951879.1 Gene:LOC108648264 / 108648264 -ID:- Length:351 Species:Xenopus tropicalis


Alignment Length:402 Identity:128/402 - (31%)
Similarity:191/402 - (47%) Gaps:102/402 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IVIPVTVVYSLIFITGVVGNISTCIVIKKNRSMHTATNYYLFSLAISDFLLLLSGVPQEVSYIWS 83
            :::|||::...:|:.|:.||:.|.||.|:.|.|.:..|.||.|:|:||.|:.| |:|.::..||.
 Frog    29 VLVPVTILCISLFLLGITGNLLTIIVFKRYRDMRSTVNMYLSSMAVSDILIFL-GLPSDLYRIWK 92

  Fly    84 KYPYVFGEYICIGRGLLAETSANATVLTITAFTVERYIAICHPFLGQAMSKLSRAIRIIVLVWIM 148
            ..||.||.::|.....|:|:....|:|.||..::|||||||.|...:.:....|...:|:|:||.
 Frog    93 YKPYAFGNFVCKFLVYLSESCTYCTILHITMVSIERYIAICFPLKAKIIITKRRVKIVIILLWIF 157

  Fly   149 AIVTAIPQAAQFGIEHYSGVE--------------QCGIVRVIVKHSFQLSTFIFFLAPMSIILV 199
            |::||.|....||:||..|.:              |.|::.|:.    .:||..||| ||..:..
 Frog   158 ALLTASPILFLFGVEHPPGFQPEETKECKYTEQSAQNGLLHVMT----WVSTIYFFL-PMFFLTF 217

  Fly   200 LYLLIGVHLYRSTLVEGPASVARRQQLKSVPSDTILYRYGGSGTAMSFNGGGSGAGTAGLMGGSG 264
            ||.||...|:::                         |:...|.|           ||.      
 Frog   218 LYGLICRKLWQT-------------------------RHWARGPA-----------TAN------ 240

  Fly   265 AQLSSVRGRLNHYGTRRVLRMLVAVVVCFFLCWAPFHAQRLIAIYAPARGAKLRDQHEFVYTVMT 329
                  ||:.|    :..::||..|||||.|||.|||..|::...|..        .|:|:..:|
 Frog   241 ------RGKYN----KATVKMLAVVVVCFMLCWLPFHIGRILFALAGV--------GEYVFFEVT 287

  Fly   330 ----YVSGVLYYLSTCINPLLYNIMSHKFREAFKAVLFGKKVSKGSLNSRNNIESRRLRRALTNS 390
                .:|.||:|||..|||:||||||.|:|.|.:.:|:.|:          .::|.|.|      
 Frog   288 QYFNLLSMVLFYLSASINPMLYNIMSEKYRSAMRRMLYPKQ----------GLQSGRTR------ 336

  Fly   391 SQTQRFSIESAE 402
              :.|||:|..|
 Frog   337 --SYRFSLEGTE 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PK1-RNP_001014620.1 7tmA_capaR 21..358 CDD:320262 117/354 (33%)
TM helix 1 21..48 CDD:320262 11/26 (42%)
TM helix 2 55..81 CDD:320262 11/25 (44%)
TM helix 3 94..124 CDD:320262 12/29 (41%)
TM helix 4 136..158 CDD:320262 9/21 (43%)
TM helix 5 178..207 CDD:320262 11/28 (39%)
TM helix 6 277..307 CDD:320262 14/29 (48%)
TM helix 7 326..351 CDD:320262 14/28 (50%)
LOC108648264XP_017951879.1 7tm_GPCRs 31..319 CDD:391938 117/353 (33%)
TM helix 1 33..57 CDD:341315 9/23 (39%)
TM helix 2 66..87 CDD:341315 11/21 (52%)
TM helix 3 104..126 CDD:341315 6/21 (29%)
TM helix 4 149..165 CDD:341315 7/15 (47%)
TM helix 5 197..220 CDD:341315 9/27 (33%)
TM helix 6 246..271 CDD:341315 13/24 (54%)
TM helix 7 288..313 CDD:341315 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380940at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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